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- ItemProgress and challenges in using stable isotopes to trace plant carbon and water relations across scales(München : European Geopyhsical Union, 2012) Werner, C.; Schnyder, H.; Cunt, M.; Keitel, C.; Zeeman, M.J.; Dawson, T.E.; Badeck, F.-W.; Brugnoli, E.; Ghashghaie, J.; Grams, T.E.E.; Kayler, Z.E.; Lakatos, M.; Lee, X.; Máguas, C.; Ogée, J.; Rascher, K.G.; Siegwolf, R.T.W.; Unger, S.; Welker, J.; Wingate, L.; Gessler, A.Stable isotope analysis is a powerful tool for assessing plant carbon and water relations and their impact on biogeochemical processes at different scales. Our process-based understanding of stable isotope signals, as well as technological developments, has progressed significantly, opening new frontiers in ecological and interdisciplinary research. This has promoted the broad utilisation of carbon, oxygen and hydrogen isotope applications to gain insight into plant carbon and water cycling and their interaction with the atmosphere and pedosphere. Here, we highlight specific areas of recent progress and new research challenges in plant carbon and water relations, using selected examples covering scales from the leaf to the regional scale. Further, we discuss strengths and limitations of recent technological developments and approaches and highlight new opportunities arising from unprecedented temporal and spatial resolution of stable isotope measurements.
- ItemBio-responsive polymer hydrogels homeostatically regulate blood coagulation(London : Nature Publishing Group, 2013) Maitz, Manfred F.; Freudenberg, U.; Tsurkan, M.V.; Fischer, M.; Beyrich, T.; Werner, C.Bio-responsive polymer architectures can empower medical therapies by engaging molecular feedback-response mechanisms resembling the homeostatic adaptation of living tissues to varying environmental constraints. Here we show that a blood coagulation-responsive hydrogel system can deliver heparin in amounts triggered by the environmental levels of thrombin, the key enzyme of the coagulation cascade, which - in turn - becomes inactivated due to released heparin. The bio-responsive hydrogel quantitatively quenches blood coagulation over several hours in the presence of pro-coagulant stimuli and during repeated incubation with fresh, non-anticoagulated blood. These features enable the introduced material to provide sustainable, autoregulated anticoagulation, addressing a key challenge of many medical therapies. Beyond that, the explored concept may facilitate the development of materials that allow the effective and controlled application of drugs and biomolecules.
- ItemIn vitro model of metastasis to bone marrow mediates prostate cancer castration resistant growth through paracrine and extracellular matrix factors(San Francisco, CA : Public Library of Science, 2012) Lescarbeau, R.M.; Seib, F.P.; Prewitz, M.; Werner, C.; Kaplan, D.L.The spread of prostate cancer cells to the bone marrow microenvironment and castration resistant growth are key steps in disease progression and significant sources of morbidity. However, the biological significance of mesenchymal stem cells (MSCs) and bone marrow derived extracellular matrix (BM-ECM) in this process is not fully understood. We therefore established an in vitro engineered bone marrow tissue model that incorporates hMSCs and BM-ECM to facilitate mechanistic studies of prostate cancer cell survival in androgen-depleted media in response to paracrine factors and BM-ECM. hMSC-derived paracrine factors increased LNCaP cell survival, which was in part attributed to IGFR and IL6 signaling. In addition, BM-ECM increased LNCaP and MDA-PCa-2b cell survival in androgen-depleted conditions, and induced chemoresistance and morphological changes in LNCaPs. To determine the effect of BM-ECM on cell signaling, the phosphorylation status of 46 kinases was examined. Increases in the phosphorylation of MAPK pathway-related proteins as well as sustained Akt phosphorylation were observed in BM-ECM cultures when compared to cultures grown on plasma-treated polystyrene. Blocking MEK1/2 or the PI3K pathway led to a significant reduction in LNCaP survival when cultured on BM-ECM in androgen-depleted conditions. The clinical relevance of these observations was determined by analyzing Erk phosphorylation in human bone metastatic prostate cancer versus non-metastatic prostate cancer, and increased phosphorylation was seen in the metastatic samples. Here we describe an engineered bone marrow model that mimics many features observed in patients and provides a platform for mechanistic in vitro studies.
- ItemSmart skin patterns protect springtails(San Francisco, CA : Public Library of Science, 2011) Helbig, R.; Nickerl, J.; Neinhuis, C.; Werner, C.Springtails, arthropods who live in soil, in decaying material, and on plants, have adapted to demanding conditions by evolving extremely effective and robust anti-adhesive skin patterns. However, details of these unique properties and their structural basis are still unknown. Here we demonstrate that collembolan skin can resist wetting by many organic liquids and at elevated pressures. We show that the combination of bristles and a comb-like hexagonal or rhombic mesh of interconnected nanoscopic granules distinguish the skin of springtails from anti-adhesive plant surfaces. Furthermore, the negative overhang in the profile of the ridges and granules were revealed to be a highly effective, but as yet neglected, design principle of collembolan skin. We suggest an explanation for the non-wetting characteristics of surfaces consisting of such profiles irrespective of the chemical composition. Many valuable opportunities arise from the translation of the described comb-like patterns and overhanging profiles of collembolan skin into man-made surfaces that combine stability against wear and friction with superior non-wetting and anti-adhesive characteristics.
- ItemGeometry-Driven Cell Organization Determines Tissue Growths in Scaffold Pores: Consequences for Fibronectin Organization(San Francisco, CA : Public Library of Science, 2013) Joly, P.; Duda, G.N.; Schöne, M.; Welzel, P.B.; Freudenberg, U.; Werner, C.; Petersen, A.To heal tissue defects, cells have to bridge gaps and generate new extracellular matrix (ECM). Macroporous scaffolds are frequently used to support the process of defect filling and thus foster tissue regeneration. Such biomaterials contain micro-voids (pores) that the cells fill with their own ECM over time. There is only limited knowledge on how pore geometry influences cell organization and matrix production, even though it is highly relevant for scaffold design. This study hypothesized that 1) a simple geometric description predicts cellular organization during pore filling at the cell level and that 2) pore closure results in a reorganization of ECM. Scaffolds with a broad distribution of pore sizes (macroporous starPEG-heparin cryogel) were used as a model system and seeded with primary fibroblasts. The strategies of cells to fill pores could be explained by a simple geometrical model considering cells as tensioned chords. The model matched qualitatively as well as quantitatively by means of cell number vs. open cross-sectional area for all pore sizes. The correlation between ECM location and cell position was higher when the pores were not filled with tissue (Pearson's coefficient ρ = 0.45±0.01) and reduced once the pores were closed (ρ = 0.26±0.04) indicating a reorganization of the cell/ECM network. Scaffold pore size directed the time required for pore closure and furthermore impacted the organization of the fibronectin matrix. Understanding how cells fill micro-voids will help to design biomaterial scaffolds that support the endogenous healing process and thus allow a fast filling of tissue defects.
- ItemBiogeochemical potential of biomass pyrolysis systems for limiting global warming to 1.5 °C(Bristol : IOP Publishing, 2018) Werner, C.; Schmidt, H.-P.; Gerten, D.; Lucht, W.; Kammann, C.Negative emission (NE) technologies are recognized to play an increasingly relevant role in strategies limiting mean global warming to 1.5 °C as specified in the Paris Agreement. The potentially significant contribution of pyrogenic carbon capture and storage (PyCCS) is, however, highly underrepresented in the discussion. In this study, we conduct the first quantitative assessment of the global potential of PyCCS as a NE technology based on biomass plantations. Using a process-based biosphere model, we calculate the land use change required to reach specific climate mitigation goals while observing biodiversity protection guardrails. We consider NE targets of 100–300 GtC following socioeconomic pathways consistent with a mean global warming of 1.5 °C as well as the option of additional carbon balancing required in case of failure or delay of decarbonization measures. The technological opportunities of PyCCS are represented by three tracks accounting for the sequestration of different pyrolysis products: biochar (as soil amendment), bio-oil (pumped into geological storages) and permanent-pyrogas (capture and storage of CO2 from gas combustion). In addition, we analyse how the gain in land induced by biochar-mediated yield increases on tropical cropland may reduce the pressure on land. Our results show that meeting the 1.5 °C goal through mitigation strategies including large-scale NE with plantation-based PyCCS may require conversion of natural vegetation to biomass plantations in the order of 133–3280 Mha globally, depending on the applied technology and the NE demand. Advancing towards additional bio-oil sequestration reduces land demand considerably by potentially up to 60%, while the benefits from yield increases account for another 3%–38% reduction (equalling 82–362 Mha). However, when mitigation commitments are increased by high balancing claims, even the most advanced PyCCS technologies and biochar-mediated co-benefits cannot compensate for delayed action towards phasing-out fossil fuels.
- ItemGrowth induction and low-oxygen apoptosis inhibition of human CD34 + progenitors in collagen gels(New York, NY : Hindawi, 2013) Avitabile, D.; Salchert, K.; Werner, C.; Capogrossi, M.C.; Pesce, M.Various reports have indicated low survival of injected progenitors into unfavorable environments such as the ischemic myocardium or lower limb tissues. This represents a major bottleneck in stem-cell-based cardiovascular regenerative medicine. Strategies to enhance survival of these cells in recipient tissues have been therefore sought to improve stem cell survival and ensure long-term engraftment. In the present contribution, we show that embedding human cord blood-derived CD34+ cells into a collagen I-based hydrogel containing cytokines is a suitable strategy to promote stem cell proliferation and protect these cells from anoxia-induced apoptosis.
- ItemTunable nano-replication to explore the omniphobic characteristics of springtail skin(London : Macmillan Publishers, 2013) Hensel, R.; Helbig, R.; Aland, S.; Voigt, A.; Neinhuis, C.; Werner, C.Springtails (Collembola) are wingless arthropods adapted to cutaneous respiration in temporarily rain-flooded and microbially contaminated habitats by a non-wetting and antiadhesive skin surface that is mechanically rather stable. Recapitulating the robust and effectively repellent surface characteristics of springtail skin in engineered materials may offer exciting opportunities for demanding applications, but it requires a detailed understanding of the underlying design principles. Towards this aim and based on our recent analysis of the structural features of springtail skin, we developed a tunable polymer replication process to dissect the contributions of different structural elements and surface chemistry to the omniphobic performance of the cuticle. The Cassie-Wenzel transition at elevated pressures was explored by in situ plastron collapse experiments and by numerical FEM simulations. The results obtained unravel the decisive role of nanoscopic cuticle structures for the protection of springtails against wetting, and explain how the evolved nanotopography enables the production of omniphobic surfaces even from intrinsically hydrophilic polymer materials.
- ItemSoft and flexible poly(ethylene glycol) nanotubes for local drug delivery(Cambridge : RSC Publ., 2018) Newland, B.; Taplan, C.; Pette, D.; Friedrichs, J.; Steinhart, M.; Wang, W.; Voit, B.; Seib, F. P.; Werner, C.Nanotubes are emerging as promising materials for healthcare applications but the selection of clinically relevant starting materials for their synthesis remains largely unexplored. Here we present, for the first time, the synthesis of poly(ethylene glycol) (PEG) based nanotubes via the photopolymerization of poly(ethylene glycol) diacrylate and other diacrylate derivatives within the pores of anodized aluminum oxide templates. Template-assisted synthesis allowed the manufacture of a diverse set of polymeric nanotubes with tunable physical characteristics including diameter (∼200-400 nm) and stiffness (405-902 kPa). PEG nanotubes were subjected to cytotoxicty assessment in cell lines and primary stem cells and showed excellent cytocompatability (IC50 > 120 μg ml-1). Nanotubes were readily drug loaded but released the majority of the drug over 5 days. Direct administration of drug loaded nanotubes to human orthotopic breast tumors substantially reduced tumor growth and metastasis and outperformed i.v. administration at the equivalent dose. Overall, this nanotube templating platform is emerging as a facile route for the manufacture of poly(ethylene glycol) nanotubes.
- ItemA novel, low-volume method for organ culture of embryonic kidneys that allows development of cortico-medullary anatomical organization(San Francisco, Calif. : Public Library of Science, 2010) Sebinger, D.D.R.; Unbekandt, M.; Ganeva, V.V.; Ofenbauer, A.; Werner, C.; Davies, J.A.Here, we present a novel method for culturing kidneys in low volumes of medium that offers more organotypic development compared to conventional methods. Organ culture is a powerful technique for studying renal development. It recapitulates many aspects of early development very well, but the established techniques have some disadvantages: in particular, they require relatively large volumes (1-3 mls) of culture medium, which can make high-throughput screens expensive, they require porous (filter) substrates which are difficult to modify chemically, and the organs produced do not achieve good cortico-medullary zonation. Here, we present a technique of growing kidney rudiments in very low volumes of medium-around 85 microliters-using silicone chambers. In this system, kidneys grow directly on glass, grow larger than in conventional culture and develop a clear anatomical cortico-medullary zonation with extended loops of Henle. © 2010 Sebinger et al.