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Methane emissions from the storage of liquid dairy manure: Influences of season, temperature and storage duration

2021, Cárdenas, Aura, Ammon, Christian, Schumacher, Britt, Stinner, Walter, Herrmann, Christiane, Schneider, Marcel, Weinrich, Sören, Fischer, Peter, Amon, Thomas, Amon, Barbara

Methane emissions from livestock manure are primary contributors to GHG emissions from agriculture and options for their mitigation must be found. This paper presents the results of a study on methane emissions from stored liquid dairy cow manure during summer and winter storage periods. Manure from the summer and winter season was stored under controlled conditions in barrels at ambient temperature to simulate manure storage conditions. Methane emissions from the manure samples from the winter season were measured in two time periods: 0 to 69 and 0 to 139 days. For the summer storage period, the experiments covered four time periods: from 0 to 70, 0 to 138, 0 to 209, and 0 to 279 continuous days, with probing every 10 weeks. Additionally, at the end of all storage experiments, samples were placed into eudiometer batch digesters, and their methane emissions were measured at 20 °C for another 60 days to investigate the potential effect of the aging of the liquid manure on its methane emissions. The experiment showed that the methane emissions from manure stored in summer were considerably higher than those from manure stored in winter. CH4 production started after approximately one month, reaching values of 0.061 kg CH4 kg−1 Volatile Solid (VS) and achieving high total emissions of 0.148 kg CH4 kg−1 VS (40 weeks). In winter, the highest emissions level was 0.0011 kg CH4 kg−1 VS (20 weeks). The outcomes of these experimental measurements can be used to suggest strategies for mitigating methane emissions from manure storage.

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CFD modelling of an animal occupied zone using an anisotropic porous medium model with velocity depended resistance parameters

2021, Doumbia, E. Moustapha, Janke, David, Yi, Qianying, Amon, Thomas, Kriegel, Martin, Hempel, Sabrina

The airflow in dairy barns is affected by many factors, such as the barn’s geometry, weather conditions, configurations of the openings, cows acting as heat sources, flow obstacles, etc. Computational fluids dynamics (CFD) has the advantages of providing detailed airflow information and allowing fully-controlled boundary conditions, and therefore is widely used in livestock building research. However, due to the limited computing power, numerous animals are difficult to be designed in detail. Consequently, there is the need to develop and use smart numerical models in order to reduce the computing power needed while at the same time keeping a comparable level of accuracy. In this work the porous medium modeling is considered to solve this problem using Ansys Fluent. A comparison between an animal occupied zone (AOZ) filled with randomly arranged 22 simplified cows’ geometry model (CM) and the porous medium model (PMM) of it, was made. Anisotropic behavior of the PMM was implemented in the porous modeling to account for turbulence influences. The velocity at the inlet of the domain has been varied from 0.1 m s−1 to 3 m s−1 and the temperature difference between the animals and the incoming air was set at 20 K. Leading to Richardson numbers Ri corresponding to the three types of heat transfer convection, i.e. natural, mixed and forced convection. It has been found that the difference between two models (the cow geometry model and the PMM) was around 2% for the pressure drop and less than 6% for the convective heat transfer. Further the usefulness of parametrized PMM with a velocity adaptive pressure drop and heat transfer coefficient is shown by velocity field validation of an on-farm measurement.

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The Role of Streptococcus spp. in Bovine Mastitis

2021, Kabelitz, Tina, Aubry, Etienne, van Vorst, Kira, Amon, Thomas, Fulde, Marcus

The Streptococcus genus belongs to one of the major pathogen groups inducing bovine mastitis. In the dairy industry, mastitis is the most common and costly disease. It not only negatively impacts economic profit due to milk losses and therapy costs, but it is an important animal health and welfare issue as well. This review describes a classification, reservoirs, and frequencies of the most relevant Streptococcus species inducing bovine mastitis (S. agalactiae, S. dysgalactiae and S. uberis). Host and environmental factors influencing mastitis susceptibility and infection rates will be discussed, because it has been indicated that Streptococcus herd prevalence is much higher than mastitis rates. After infection, we report the sequence of cow immune reactions and differences in virulence factors of the main Streptococcus species. Different mastitis detection techniques together with possible conventional and alternative therapies are described. The standard approach treating streptococcal mastitis is the application of ß-lactam antibiotics. In streptococci, increased antimicrobial resistance rates were identified against enrofloxacin, tetracycline, and erythromycin. At the end, control and prevention measures will be considered, including vaccination, hygiene plan, and further interventions. It is the aim of this review to estimate the contribution and to provide detailed knowledge about the role of the Streptococcus genus in bovine mastitis.

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Methane Emission Characteristics of Naturally Ventilated Cattle Buildings

2020, Hempel, Sabrina, Willink, Diliara, Janke, David, Ammon, Christian, Amon, Barbara, Amon, Thomas

The mandate to limit global temperature rise calls for a reliable quantification of gaseous pollutant emissions as a basis for effective mitigation. Methane emissions from ruminant fermentation are of particular relevance in the context of greenhouse gas mitigation. The emission dynamics are so far insufficiently understood. We analyzed hourly methane emission data collected during contrasting seasons from two naturally ventilated dairy cattle buildings with concrete floor and performed a second order polynomial regression. We found a parabolic temperature dependence of the methane emissions irrespective of the measurement site and setup. The position of the parabola vertex varied when considering different hours of the day. The circadian rhythm of methane emissions was represented by the pattern of the fitted values of the constant term of the polynomial and could be well explained by feeding management and air flow conditions. We found barn specific emission minima at ambient temperatures around 10 °C to 15 °C. As this identified temperature optimum coincides with the welfare temperature of dairy cows, we concluded that temperature regulation of dairy cow buildings with concrete floor should be considered and further investigated as an emission mitigation measure. Our results further indicated that empirical modeling of methane emissions from the considered type of buildings with a second order polynomial for the independent variable air temperature can increase the accuracy of predicted long-term emission values for regions with pronounced seasonal temperature fluctuations

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Functional relationship of particulate matter (PM) emissions, animal species, and moisture content during manure application

2020, Kabelitz, Tina, Ammon, Christian, Funk, Roger, Münch, Steffen, Biniasch, Oliver, Nübel, Ulrich, Thiel, Nadine, Rösler, Uwe, Siller, Paul, Amon, Barbara, Aarnink, André J.A., Amon, Thomas

Livestock manure is recycled to agricultural land as organic fertilizer. Due to the extensive usage of antibiotics in conventional animal farming, antibiotic-resistant bacteria are highly prevalent in feces and manure. The spread of wind-driven particulate matter (PM) with potentially associated harmful bacteria through manure application may pose a threat to environmental and human health. We studied whether PM was aerosolized during the application of solid and dried livestock manure and the functional relationship between PM release, manure dry matter content (DM), treatment and animal species. In parallel, manure and resulting PM were investigated for the survival of pathogenic and antibiotic-resistant bacterial species. The results showed that from manure with a higher DM smaller particles were generated and more PM was emitted. A positive correlation between manure DM and PM aerosolization rate was observed. There was a species-dependent critical dryness level (poultry: 60% DM, pig: 80% DM) where manure began to release PM into the environment. The maximum PM emission potentials were 1 and 3 kg t−1 of applied poultry and pig manure, respectively. Dried manure and resulting PM contained strongly reduced amounts of investigated pathogenic and antibiotic-resistant microorganisms compared to fresh samples. An optimal manure DM regarding low PM emissions and reduced pathogen viability was defined from our results, which was 55–70% DM for poultry manure and 75–85% DM for pig manure. The novel findings of this study increase our detailed understanding and basic knowledge on manure PM emissions and enable optimization of manure management, aiming a manure DM that reduces PM emissions and pathogenic release into the environment.

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Particulate matter emissions during field application of poultry manure - The influence of moisture content and treatment

2021, Kabelitz, Tina, Biniasch, Oliver, Ammon, Christian, Nübel, Ulrich, Thiel, Nadine, Janke, David, Swaminathan, Senthilathiban, Funk, Roger, Münch, Steffen, Rösler, Uwe, Siller, Paul, Amon, Barbara, Aarnink, André J. A., Amon, Thomas

Along with industry and transportation, agriculture is one of the main sources of primary particulate matter (PM) emissions worldwide. Bioaerosol formation and PM release during livestock manure field application and the associated threats to environmental and human health are rarely investigated. In the temperate climate zone, field fertilization with manure seasonally contributes to local PM air pollution regularly twice per year (spring and autumn). Measurements in a wind tunnel, in the field and computational fluid dynamics (CFD) simulations were performed to analyze PM aerosolization during poultry manure application and the influence of manure moisture content and treatment. A positive correlation between manure dry matter content (DM) and PM release was observed. Therefore, treatments strongly increasing the DM of poultry manure should be avoided. However, high manure DM led to reduced microbial abundance and, therefore, to a lower risk of environmental pathogen dispersion. Considering the findings of PM and microbial measurements, the optimal poultry manure DM range for field fertilization was identified as 50–70%. Maximum PM10 concentrations of approx. 10 mg per m3 of air were measured during the spreading of dried manure (DM 80%), a concentration that is classified as strongly harmful. The modeling of PM aerosolization processes indicated a low health risk beyond a distance of 400 m from the manure application source. The detailed knowledge about PM aerosolization during manure field application was improved with this study, enabling manure management optimization for lower PM aerosolization and pathogenic release into the environment.

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Agricultural fertilization with poultry manure results in persistent environmental contamination with the pathogen Clostridioides difficile

2021, Frentrup, Martinique, Thiel, Nadine, Junker, Vera, Behrens, Wiebke, Münch, Steffen, Siller, Paul, Kabelitz, Tina, Faust, Matthias, Indra, Alexander, Baumgartner, Stefanie, Schepanski, Kerstin, Amon, Thomas, Roesler, Uwe, Funk, Roger, Nübel, Ulrich

During a field experiment applying broiler manure for fertilization of agricultural land, we detected viable Clostridioides (also known as Clostridium) difficile in broiler faeces, manure, dust and fertilized soil. A large diversity of toxigenic C. difficile isolates was recovered, including PCR ribotypes common from human disease. Genomic relatedness of C. difficile isolates from dust and from soil, recovered more than 2 years after fertilization, traced their origins to the specific chicken farm that had delivered the manure. We present evidence of long-term contamination of agricultural soil with manure-derived C. difficile and demonstrate the potential for airborne dispersal of C. difficile through dust emissions during manure application. Clostridioides genome sequences virtually identical to those from manure had been recovered from chicken meat and from human infections in previous studies, suggesting broiler-associated C. difficile are capable of zoonotic transmission.

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How the Selection of Training Data and Modeling Approach Affects the Estimation of Ammonia Emissions from a Naturally Ventilated Dairy Barn—Classical Statistics versus Machine Learning

2020, Hempel, Sabrina, Adolphs, Julian, Landwehr, Niels, Janke, David, Amon, Thomas

Environmental protection efforts can only be effective in the long term with a reliable quantification of pollutant gas emissions as a first step to mitigation. Measurement and analysis strategies must permit the accurate extrapolation of emission values. We systematically analyzed the added value of applying modern machine learning methods in the process of monitoring emissions from naturally ventilated livestock buildings to the atmosphere. We considered almost 40 weeks of hourly emission values from a naturally ventilated dairy cattle barn in Northern Germany. We compared model predictions using 27 different scenarios of temporal sampling, multiple measures of model accuracy, and eight different regression approaches. The error of the predicted emission values with the tested measurement protocols was, on average, well below 20%. The sensitivity of the prediction to the selected training dataset was worse for the ordinary multilinear regression. Gradient boosting and random forests provided the most accurate and robust emission value predictions, accompanied by the second-smallest model errors. Most of the highly ranked scenarios involved six measurement periods, while the scenario with the best overall performance was: One measurement period in summer and three in the transition periods, each lasting for 14 days.

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Airborne bacterial emission fluxes from manure-fertilized agricultural soil

2020, Thiel, Nadine, Münch, Steffen, Behrens, Wiebke, Junker, Vera, Faust, Matthias, Biniasch, Oliver, Kabelitz, Tina, Siller, Paul, Boedeker, Christian, Schumann, Peter, Roesler, Uwe, Amon, Thomas, Schepanski, Kerstin, Funk, Roger, Nübel, Ulrich

This is the first study to quantify the dependence on wind velocity of airborne bacterial emission fluxes from soil. It demonstrates that manure bacteria get aerosolized from fertilized soil more easily than soil bacteria, and it applies bacterial genomic sequencing for the first time to trace environmental faecal contamination back to its source in the chicken barn. We report quantitative, airborne emission fluxes of bacteria during and following the fertilization of agricultural soil with manure from broiler chickens. During the fertilization process, the concentration of airborne bacteria culturable on blood agar medium increased more than 600 000-fold, and 1 m3 of air carried 2.9 × 105 viable enterococci, i.e. indicators of faecal contamination which had been undetectable in background air samples. Trajectory modelling suggested that atmospheric residence times and dispersion pathways were dependent on the time of day at which fertilization was performed. Measurements in a wind tunnel indicated that airborne bacterial emission fluxes from freshly fertilized soil under local climatic conditions on average were 100-fold higher than a previous estimate of average emissions from land. Faecal bacteria collected from soil and dust up to seven weeks after fertilization could be traced to their origins in the poultry barn by genomic sequencing. Comparative analyses of 16S rRNA gene sequences from manure, soil and dust showed that manure bacteria got aerosolized preferably, likely due to their attachment to low-density manure particles. Our data show that fertilization with manure may cause substantial increases of bacterial emissions from agricultural land. After mechanical incorporation of manure into soil, however, the associated risk of airborne infection is low.

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Heat stress risk in European dairy cattle husbandry under different climate change scenarios – uncertainties and potential impacts

2019, Hempel, Sabrina, Menz, Christoph, Pinto, Severino, Galán, Elena, Janke, David, Estellés, Fernando, Müschner-Siemens, Theresa, Wang, Xiaoshuai, Heinicke, Julia, Zhang, Guoqiang, Amon, Barbara, del Prado, Agustín, Amon, Thomas

In the last decades, a global warming trend was observed. Along with the temperature increase, modifications in the humidity and wind regime amplify the regional and local impacts on livestock husbandry. Direct impacts include the occurrence of climatic stress conditions. In Europe, cows are economically highly relevant and are mainly kept in naturally ventilated buildings that are most susceptible to climate change. The high-yielding cows are particularly vulnerable to heat stress. Modifications in housing management are the main measures taken to improve the ability of livestock to cope with these conditions. Measures are typically taken in direct reaction to uncomfortable conditions instead of in anticipation of a long-term risk for climatic stress. Measures that balance welfare, environmental and economic issues are barely investigated in the context of climate change and are thus almost not available for commercial farms. Quantitative analysis of the climate change impacts on animal welfare and linked economic and environmental factors is rare. Therefore, we used a numerical modeling approach to estimate the future heat stress risk in such dairy cattle husbandry systems. The indoor climate was monitored inside three reference barns in central Europe and the Mediterranean regions. An artificial neuronal network (ANN) was trained to relate the outdoor weather conditions provided by official meteorological weather stations to the measured indoor microclimate. Subsequently, this ANN model was driven by an ensemble of regional climate model projections with three different greenhouse gas concentration scenarios. For the evaluation of the heat stress risk, we considered the number and duration of heat stress events. Based on the changes in the heat stress events, various economic and environmental impacts were estimated. The impacts of the projected increase in heat stress risk varied among the barns due to different locations and designs as well as the anticipated climate change (considering different climate models and future greenhouse gas concentrations). There was an overall increasing trend in number and duration of heat stress events. At the end of the century, the number of annual stress events can be expected to increase by up to 2000, while the average duration of the events increases by up to 22 h compared to the end of the last century. This implies strong impacts on economics, environment and animal welfare and an urgent need for mid-term adaptation strategies. We anticipated that up to one-tenth of all hours of a year, correspondingly one-third of all days, will be classified as critical heat stress conditions. Due to heat stress, milk yield may decrease by about 2.8 % relative to the present European milk yield, and farmers may expect financial losses in the summer season of about 5.4 % of their monthly income. In addition, an increasing demand for emission reduction measures must be expected, as an emission increase of about 16 Gg of ammonia and 0.1 Gg of methane per year can be expected under the anticipated heat stress conditions. The cattle respiration rate increases by up to 60 %, and the standing time may be prolonged by 1 h. This causes health issues and increases the probability of medical treatments. The various impacts imply feedback loops in the climate system which are presently underexplored. Hence, future in-depth studies on the different impacts and adaptation options at different stress levels are highly recommended.