In this paper we introduce the notion of a gemetric associative r-matrix attached to a genus one fibration with a section and irreducible fibres. It allows us to study degenerations of solutions of the classical Yang-Baxter equation using the approach of Polishchuk. We also calculate certain solutions of the classical, quantum and associative Yang-Baxter equations obtained from moduli spaces of (semi-)stable vector bundles on Weierstraß cubic curves.
