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- ItemModeling of Chemical Reaction Systems with Detailed Balance Using Gradient Structures(New York, NY [u.a.] : Springer Science + Business Media B.V., 2020) Maas, Jan; Mielke, AlexanderWe consider various modeling levels for spatially homogeneous chemical reaction systems, namely the chemical master equation, the chemical Langevin dynamics, and the reaction-rate equation. Throughout we restrict our study to the case where the microscopic system satisfies the detailed-balance condition. The latter allows us to enrich the systems with a gradient structure, i.e. the evolution is given by a gradient-flow equation. We present the arising links between the associated gradient structures that are driven by the relative entropy of the detailed-balance steady state. The limit of large volumes is studied in the sense of evolutionary Γ-convergence of gradient flows. Moreover, we use the gradient structures to derive hybrid models for coupling different modeling levels.
- ItemThermoviscoelasticity in Kelvin–Voigt Rheology at Large Strains(Berlin ; Heidelberg : Springer, 2020) Mielke, Alexander; Roubíček, TomášThe frame-indifferent thermodynamically-consistent model of thermoviscoelasticity at large strain is formulated in the reference configuration by using the concept of the second-grade nonsimple materials. We focus on physically correct viscous stresses that are frame indifferent under time-dependent rotations. Also elastic stresses are frame indifferent under rotations and respect positivity of the determinant of the deformation gradient. The heat transfer is governed by the Fourier law in the actual deformed configuration, which leads to a nontrivial description when pulled back to the reference configuration. The existence of weak solutions in the quasistatic setting, that is inertial forces are ignored, is shown by time discretization. © 2020, The Author(s).
- ItemRelating a rate-independent system and a gradient system for the case of one-homogeneous potentials(Berlin : Weierstraß-Institut für Angewandte Analysis und Stochastik, 2020) Mielke, AlexanderWe consider a non-negative and one-homogeneous energy functional $mathcal J$ on a Hilbert space. The paper provides an exact relation between the solutions of the associated gradient-flow equations and the energetic solutions generated via the rate-inpendent system given in terms of the time-dependent functional $mathcal E(t,u)=t mathcal J(u)$ and the norm as a dissipation distance. The relation between the two flows is given via a solution-dependent reparametrization of time that can be guessed from the homogeneities of energy and dissipations in the two equations. We provide several examples including the total-variation flow and show that equivalence of the two systems through a solution dependent reparametrization of the time. Making the relation mathematically rigorous includes a careful analysis of the jumps in energetic solutions which correspond to constant-speed intervals for the solutins of the gradient-flow equation. As a major result we obtain a non-trivial existence and uniqueness result for the energetic rate-independent system.
- ItemA rigorous derivation and energetics of a wave equation with fractional damping(Berlin : Weierstraß-Institut für Angewandte Analysis und Stochastik, 2020) Mielke, Alexander; Netz, Roland R.; Zendehroud, SinaWe consider a linear system that consists of a linear wave equation on a horizontal hypersurface and a parabolic equation in the half space below. The model describes longitudinal elastic waves in organic monolayers at the water-air interface, which is an experimental setup that is relevant for understanding wave propagation in biological membranes. We study the scaling regime where the relevant horizontal length scale is much larger than the vertical length scale and provide a rigorous limit leading to a fractionally-damped wave equation for the membrane. We provide the associated existence results via linear semigroup theory and show convergence of the solutions in the scaling limit. Moreover, based on the energy-dissipation structure for the full model, we derive a natural energy and a natural dissipation function for the fractionally-damped wave equation with a time derivative of order 3/2.
- ItemModeling of chemical reaction systems with detailed balance using gradient structures(Berlin : Weierstraß-Institut für Angewandte Analysis und Stochastik, 2020) Maas, Jan; Mielke, AlexanderWe consider various modeling levels for spatially homogeneous chemical reaction systems, namely the chemical master equation, the chemical Langevin dynamics, and the reaction-rate equation. Throughout we restrict our study to the case where the microscopic system satisfies the detailed-balance condition. The latter allows us to enrich the systems with a gradient structure, i.e. the evolution is given by a gradient-flow equation. We present the arising links between the associated gradient structures that are driven by the relative entropy of the detailed-balance steady state. The limit of large volumes is studied in the sense of evolutionary Γ-convergence of gradient flows. Moreover, we use the gradient structures to derive hybrid models for coupling different modeling levels.
- ItemOn the Darwin--Howie--Whelan equations for the scattering of fast electrons described by the Schrödinger equation(Berlin : Weierstraß-Institut für Angewandte Analysis und Stochastik, 2020) Koprucki, Thomas; Maltsi, Anieza; Mielke, AlexanderThe Darwin-Howie-Whelan equations are commonly used to describe and simulate the scattering of fast electrons in transmission electron microscopy. They are a system of infinitely many envelope functions, derived from the Schrödinger equation. However, for the simulation of images only a finite set of envelope functions is used, leading to a system of ordinary differential equations in thickness direction of the specimen. We study the mathematical structure of this system and provide error estimates to evaluate the accuracy of special approximations, like the two-beam and the systematic-row approximation.
- ItemEDP-convergence for nonlinear fast-slow reaction systems with detailed balance(Berlin : Weierstraß-Institut für Angewandte Analysis und Stochastik, 2020) Mielke, Alexander; Peletier, Mark A.; Stephan, ArturWe consider nonlinear reaction systems satisfying mass-action kinetics with slow and fast reactions. It is known that the fast-reaction-rate limit can be described by an ODE with Lagrange multipliers and a set of nonlinear constraints that ask the fast reactions to be in equilibrium. Our aim is to study the limiting gradient structure which is available if the reaction system satisfies the detailed-balance condition. The gradient structure on the set of concentration vectors is given in terms of the relative Boltzmann entropy and a cosh-type dissipation potential. We show that a limiting or effective gradient structure can be rigorously derived via EDP convergence, i.e. convergence in the sense of the Energy-Dissipation Principle for gradient flows. In general, the effective entropy will no longer be of Boltzmann type and the reactions will no longer satisfy mass-action kinetics.