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- ItemIdentifying environmental controls on vegetation greenness phenology through model-data integration(München : European Geopyhsical Union, 2014) Forkel, M.; Carvalhais, N.; Schaphoff, S.; v. Bloh, W.; Migliavacca, M.; Thurner, M.; Thonicke, K.Existing dynamic global vegetation models (DGVMs) have a limited ability in reproducing phenology and decadal dynamics of vegetation greenness as observed by satellites. These limitations in reproducing observations reflect a poor understanding and description of the environmental controls on phenology, which strongly influence the ability to simulate longer-term vegetation dynamics, e.g. carbon allocation. Combining DGVMs with observational data sets can potentially help to revise current modelling approaches and thus enhance the understanding of processes that control seasonal to long-term vegetation greenness dynamics. Here we implemented a new phenology model within the LPJmL (Lund Potsdam Jena managed lands) DGVM and integrated several observational data sets to improve the ability of the model in reproducing satellite-derived time series of vegetation greenness. Specifically, we optimized LPJmL parameters against observational time series of the fraction of absorbed photosynthetic active radiation (FAPAR), albedo and gross primary production to identify the main environmental controls for seasonal vegetation greenness dynamics. We demonstrated that LPJmL with new phenology and optimized parameters better reproduces seasonality, inter-annual variability and trends of vegetation greenness. Our results indicate that soil water availability is an important control on vegetation phenology not only in water-limited biomes but also in boreal forests and the Arctic tundra. Whereas water availability controls phenology in water-limited ecosystems during the entire growing season, water availability co-modulates jointly with temperature the beginning of the growing season in boreal and Arctic regions. Additionally, water availability contributes to better explain decadal greening trends in the Sahel and browning trends in boreal forests. These results emphasize the importance of considering water availability in a new generation of phenology modules in DGVMs in order to correctly reproduce observed seasonal-to-decadal dynamics of vegetation greenness.
- ItemA model-based constraint on CO2 fertilisation(München : European Geopyhsical Union, 2013) Holden, P.B.; Edwards, N.R.; Gerten, D.; Schaphoff, S.We derive a constraint on the strength of CO2 fertilisation of the terrestrial biosphere through a "top-down" approach, calibrating Earth system model parameters constrained by the post-industrial increase of atmospheric CO2 concentration. We derive a probabilistic prediction for the globally averaged strength of CO2 fertilisation in nature, for the period 1850 to 2000 AD, implicitly net of other limiting factors such as nutrient availability. The approach yields an estimate that is independent of CO2 enrichment experiments. To achieve this, an essential requirement was the incorporation of a land use change (LUC) scheme into the GENIE Earth system model. Using output from a 671-member ensemble of transient GENIE simulations, we build an emulator of the change in atmospheric CO2 concentration change since the preindustrial period. We use this emulator to sample the 28-dimensional input parameter space. A Bayesian calibration of the emulator output suggests that the increase in gross primary productivity (GPP) in response to a doubling of CO2 from preindustrial values is very likely (90% confidence) to exceed 20%, with a most likely value of 40–60%. It is important to note that we do not represent all of the possible contributing mechanisms to the terrestrial sink. The missing processes are subsumed into our calibration of CO2 fertilisation, which therefore represents the combined effect of CO2 fertilisation and additional missing processes. If the missing processes are a net sink then our estimate represents an upper bound. We derive calibrated estimates of carbon fluxes that are consistent with existing estimates. The present-day land–atmosphere flux (1990–2000) is estimated at −0.7 GTC yr−1 (likely, 66% confidence, in the range 0.4 to −1.7 GTC yr−1). The present-day ocean–atmosphere flux (1990–2000) is estimated to be −2.3 GTC yr−1 (likely in the range −1.8 to −2.7 GTC yr−1). We estimate cumulative net land emissions over the post-industrial period (land use change emissions net of the CO2 fertilisation and climate sinks) to be 66 GTC, likely to lie in the range 0 to 128 GTC.
- ItemConsistent negative response of US crops to high temperatures in observations and crop models(London : Nature Publishing Group, 2017) Schauberger, B.; Archontoulis, S.; Arneth, A.; Balkovic, J.; Ciais, P.; Deryng, D.; Elliott, J.; Folberth, C.; Khabarov, N.; Müller, C.; Pugh, T.A.M.; Rolinski, S.; Schaphoff, S.; Schmid, E.; Wang, X.; Schlenker, W.; Frieler, K.High temperatures are detrimental to crop yields and could lead to global warming-driven reductions in agricultural productivity. To assess future threats, the majority of studies used process-based crop models, but their ability to represent effects of high temperature has been questioned. Here we show that an ensemble of nine crop models reproduces the observed average temperature responses of US maize, soybean and wheat yields. Each day >30 °C diminishes maize and soybean yields by up to 6% under rainfed conditions. Declines observed in irrigated areas, or simulated assuming full irrigation, are weak. This supports the hypothesis that water stress induced by high temperatures causes the decline. For wheat a negative response to high temperature is neither observed nor simulated under historical conditions, since critical temperatures are rarely exceeded during the growing season. In the future, yields are modelled to decline for all three crops at temperatures >30 °C. Elevated CO 2 can only weakly reduce these yield losses, in contrast to irrigation.
- ItemA new climate dataset for systematic assessments of climate change impacts as a function of global warming(München : European Geopyhsical Union, 2012) Heinke, J.; Ostberg, S.; Schaphoff, S.; Frieler, K.; Müller, C.; Gerten, D.; Meinshausen, M.; Lucht, W.Interactions between food demand, biomass energy and forest preservation are driving both food prices and land-use changes, regionally and globally. This study presents a new model called Nexus Land-Use version 1.0 which describes these interactions through a generic representation of agricultural intensification mechanisms within agricultural lands. The Nexus Land-Use model equations combine biophysics and economics into a single coherent framework to calculate crop yields, food prices, and resulting pasture and cropland areas within 12 regions inter-connected with each other by international trade. The representation of cropland and livestock production systems in each region relies on three components: (i) a biomass production function derived from the crop yield response function to inputs such as industrial fertilisers; (ii) a detailed representation of the livestock production system subdivided into an intensive and an extensive component, and (iii) a spatially explicit distribution of potential (maximal) crop yields prescribed from the Lund-Postdam-Jena global vegetation model for managed Land (LPJmL). The economic principles governing decisions about land-use and intensification are adapted from the Ricardian rent theory, assuming cost minimisation for farmers. In contrast to the other land-use models linking economy and biophysics, crops are aggregated as a representative product in calories and intensification for the representative crop is a non-linear function of chemical inputs. The model equations and parameter values are first described in details. Then, idealised scenarios exploring the impact of forest preservation policies or rising energy price on agricultural intensification are described, and their impacts on pasture and cropland areas are investigated.
- ItemWater savings potentials of irrigation systems: Global simulation of processes and linkages(Göttingen : Copernicus GmbH, 2015) Jägermeyr, J.; Gerten, D.; Heinke, J.; Schaphoff, S.; Kummu, M.; Lucht, W.
- ItemObservation-based modelling of permafrost carbon fluxes with accounting for deep carbon deposits and thermokarst activity(München : European Geopyhsical Union, 2015) Schneider von Deimling, T.; Grosse, G.; Strauss, J.; Schirrmeister, L.; Morgenstern, A.; Schaphoff, S.; Meinshausen, M.; Boike, J.High-latitude soils store vast amounts of perennially frozen and therefore inert organic matter. With rising global temperatures and consequent permafrost degradation, a part of this carbon stock will become available for microbial decay and eventual release to the atmosphere. We have developed a simplified, two-dimensional multi-pool model to estimate the strength and timing of future carbon dioxide (CO2) and methane (CH4) fluxes from newly thawed permafrost carbon (i.e. carbon thawed when temperatures rise above pre-industrial levels). We have especially simulated carbon release from deep deposits in Yedoma regions by describing abrupt thaw under newly formed thermokarst lakes. The computational efficiency of our model allowed us to run large, multi-centennial ensembles under various scenarios of future warming to express uncertainty inherent to simulations of the permafrost carbon feedback. Under moderate warming of the representative concentration pathway (RCP) 2.6 scenario, cumulated CO2 fluxes from newly thawed permafrost carbon amount to 20 to 58 petagrams of carbon (Pg-C) (68% range) by the year 2100 and reach 40 to 98 Pg-C in 2300. The much larger permafrost degradation under strong warming (RCP8.5) results in cumulated CO2 release of 42 to 141 Pg-C and 157 to 313 Pg-C (68% ranges) in the years 2100 and 2300, respectively. Our estimates only consider fluxes from newly thawed permafrost, not from soils already part of the seasonally thawed active layer under pre-industrial climate. Our simulated CH4 fluxes contribute a few percent to total permafrost carbon release yet they can cause up to 40% of total permafrost-affected radiative forcing in the 21st century (upper 68% range). We infer largest CH4 emission rates of about 50 Tg-CH4 per year around the middle of the 21st century when simulated thermokarst lake extent is at its maximum and when abrupt thaw under thermokarst lakes is taken into account. CH4 release from newly thawed carbon in wetland-affected deposits is only discernible in the 22nd and 23rd century because of the absence of abrupt thaw processes. We further show that release from organic matter stored in deep deposits of Yedoma regions crucially affects our simulated circumpolar CH4 fluxes. The additional warming through the release from newly thawed permafrost carbon proved only slightly dependent on the pathway of anthropogenic emission and amounts to about 0.03–0.14 °C (68% ranges) by end of the century. The warming increased further in the 22nd and 23rd century and was most pronounced under the RCP6.0 scenario, adding 0.16 to 0.39 °C (68% range) to simulated global mean surface air temperatures in the year 2300.
- ItemModeling vegetation and carbon dynamics of managed grasslands at the global scale with LPJmL 3.6(Göttingen : Copernicus GmbH, 2018) Rolinski, S.; Müller, C.; Heinke, J.; Weindl, I.; Biewald, A.; Leon Bodirsky, B.; Bondeau, A.; Boons-Prins, E.R.; Bouwman, A.F.; Leffelaar, P.A.; Roller, J.A.T.; Schaphoff, S.; Thonicke, K.Grassland management affects the carbon fluxes of one-third of the global land area and is thus an important factor for the global carbon budget. Nonetheless, this aspect has been largely neglected or underrepresented in global carbon cycle models. We investigate four harvesting schemes for the managed grassland implementation of the dynamic global vegetation model (DGVM) Lund-Potsdam-Jena managed Land (LPJmL) that facilitate a better representation of actual management systems globally. We describe the model implementation and analyze simulation results with respect to harvest, net primary productivity and soil carbon content and by evaluating them against reported grass yields in Europe.We demonstrate the importance of accounting for differences in grassland management by assessing potential livestock grazing densities as well as the impacts of grazing, grazing intensities and mowing systems on soil carbon stocks. Grazing leads to soil carbon losses in polar or arid regions even at moderate livestock densities ( <0.4 livestock units per hectare-LSUha-1) but not in temperate regions even at much higher densities (0.4 to 1.2 LSUha-1). Applying LPJmL with the new grassland management options enables assessments of the global grassland production and its impact on the terrestrial biogeochemical cycles but requires a global data set on current grassland management.
- ItemLPJmL4 - A dynamic global vegetation model with managed land - Part 2: Model evaluation(Göttingen : Copernicus GmbH, 2018) Schaphoff, S.; Forkel, M.; Müller, C.; Knauer, J.; Von, Bloh, W.; Gerten, D.; Jägermeyr, J.; Lucht, W.; Rammig, A.; Thonicke, K.; Waha, K.The dynamic global vegetation model LPJmL4 is a process-based model that simulates climate and land use change impacts on the terrestrial biosphere, agricultural production, and the water and carbon cycle. Different versions of the model have been developed and applied to evaluate the role of natural and managed ecosystems in the Earth system and the potential impacts of global environmental change. A comprehensive model description of the new model version, LPJmL4, is provided in a companion paper (Schaphoff et al., 2018c). Here, we provide a full picture of the model performance, going beyond standard benchmark procedures and give hints on the strengths and shortcomings of the model to identify the need for further model improvement. Specifically, we evaluate LPJmL4 against various datasets from in situ measurement sites, satellite observations, and agricultural yield statistics. We apply a range of metrics to evaluate the quality of the model to simulate stocks and flows of carbon and water in natural and managed ecosystems at different temporal and spatial scales. We show that an advanced phenology scheme improves the simulation of seasonal fluctuations in the atmospheric CO2 concentration, while the permafrost scheme improves estimates of carbon stocks. The full LPJmL4 code including the new developments will be supplied open source through . We hope that this will lead to new model developments and applications that improve the model performance and possibly build up a new understanding of the terrestrial biosphere.
- ItemLPJmL4 - A dynamic global vegetation model with managed land - Part 1: Model description(Göttingen : Copernicus GmbH, 2018) Schaphoff, S.; Von Bloh, W.; Rammig, A.; Thonicke, K.; Biemans, H.; Forkel, M.; Gerten, D.; Heinke, J.; Jägermeyr, J.; Knauer, J.; Langerwisch, F.; Lucht, W.; Müller, C.; Rolinski, S.; Waha, K.This paper provides a comprehensive description of the newest version of the Dynamic Global Vegetation Model with managed Land, LPJmL4. This model simulates - internally consistently - the growth and productivity of both natural and agricultural vegetation as coherently linked through their water, carbon, and energy fluxes. These features render LPJmL4 suitable for assessing a broad range of feedbacks within and impacts upon the terrestrial biosphere as increasingly shaped by human activities such as climate change and land use change. Here we describe the core model structure, including recently developed modules now unified in LPJmL4. Thereby, we also review LPJmL model developments and evaluations in the field of permafrost, human and ecological water demand, and improved representation of crop types. We summarize and discuss LPJmL model applications dealing with the impacts of historical and future environmental change on the terrestrial biosphere at regional and global scale and provide a comprehensive overview of LPJmL publications since the first model description in 2007. To demonstrate the main features of the LPJmL4 model, we display reference simulation results for key processes such as the current global distribution of natural and managed ecosystems, their productivities, and associated water fluxes. A thorough evaluation of the model is provided in a companion paper. By making the model source code freely available at https://gitlab.pik-potsdam.de/lpjml/LPJmL we hope to stimulate the application and further development of LPJmL4 across scientific communities in support of major activities such as the IPCC and SDG process.