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Hyperspectral Imaging Tera Hertz System for Soil Analysis : Initial Results

2020, Dworak, Volker, Mahns, Benjamin, Selbeck, Jörn, Gebbers, Robin, Weltzien, Cornelia

Analyzing soils using conventional methods is often time consuming and costly due to their complexity. These methods require soil sampling (e.g., by augering), pretreatment of samples (e.g., sieving, extraction), and wet chemical analysis in the laboratory. Researchers are seeking alternative sensor-based methods that can provide immediate results with little or no excavation and pretreatment of samples. Currently, visible and infrared spectroscopy, electrical resistivity, gamma ray spectroscopy, and X-ray spectroscopy have been investigated extensively for their potential utility in soil sensing. Little research has been conducted on the application of THz (Tera Hertz) spectroscopy in soil science. The Tera Hertz band covers the frequency range between 100 GHz and 10 THz of the electromagnetic spectrum. One important feature of THz radiation is its correspondence with the particle size of the fine fraction of soil minerals (clay < 2 µm to sand < 2 mm). The particle size distribution is a fundamental soil property that governs soil water and nutrient content, among other characteristics. The interaction of THz radiation with soil particles creates detectable Mie scattering, which is the elastic scattering of electromagnetic waves by particles whose diameter corresponds approximately to the wavelength of the radiation. However, single-spot Mie scattering spectra are difficult to analyze and the understanding of interaction between THz radiation and soil material requires basic research. To improve the interpretation of THz spectra, a hyperspectral imaging system was developed. The addition of the spatial dimension to THz spectra helps to detect relevant features. Additionally, multiple samples can be scanned in parallel and measured under identical conditions, and the high number of data points within an image can improve the statistical accuracy. Technical details of the newly designed hyperspectral imaging THz system working from 250 to 370 GHz are provided. Results from measurements of different soil samples and buried objects in soil demonstrated its performance. The system achieved an optical resolution of about 2 mm. The sensitivity of signal damping to the changes in particle size of 100 µm is about 10 dB. Therefore, particle size variations in the µm range should be detectable. In conclusion, automated hyperspectral imaging reduced experimental effort and time consumption, and provided reliable results because of the measurement of hundreds of sample positions in one run. At this stage, the proposed setup cannot replace the current standard laboratory methods, but the present study represents the initial step to develop a new automated method for soil analysis and imaging.

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Analyzing temporal and spatial characteristics of crop parameters using Sentinel-1 backscatter data

2019, Harfenmeister, Katharina, Spengler, Daniel, Weltzien, Cornelia

The knowledge about heterogeneity on agricultural fields is essential for a sustainable and effective field management. This study investigates the performance of Synthetic Aperture Radar (SAR) data of the Sentinel-1 satellites to detect variability between and within agricultural fields in two test sites in Germany. For this purpose, the temporal profiles of the SAR backscatter in VH and VV polarization as well as their ratio VH/VV of multiple wheat and barley fields are illustrated and interpreted considering differences between acquisition settings, years, crop types and fields. Within-field variability is examined by comparing the SAR backscatter with several crop parameters measured at multiple points in 2017 and 2018. Structural changes, particularly before and after heading, as well as moisture and crop cover differences are expressed in the backscatter development. Furthermore, the crop parameters wet and dry biomass, absolute and relative vegetation water content, leaf area index (LAI) and plant height are related to SAR backscatter parameters using linear and exponential as well as multiple regression. The regression performance is evaluated using the coefficient of determination (R2) and the root mean square error (RMSE) and is strongly dependent on the phenological growth stage. Wheat shows R2 values around 0.7 for VV backscatter and multiple regression and most crop parameters before heading. Single fields even reach R2 values above 0.9 for VV backscatter and for multiple regression related to plant height with RMSE values around 10 cm. The formulation of clear rules remains challenging, as there are multiple influencing factors and uncertainties and a lack of conformity. © 2019 by the authors.

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In-Situ Measurement of Fresh Produce Respiration Using a Modular Sensor-Based System

2020, Keshri, Nandita, Truppel, Ingo, Herppich, Werner B., Geyer, Martin, Weltzien, Cornelia, Mahajan, Pramod V

In situ, continuous and real-time monitoring of respiration (R) and respiratory quotient (RQ) are crucial for identifying the optimal conditions for the long-term storage of fresh produce. This study reports the application of a gas sensor (RMS88) and a modular respirometer for in situ real-time monitoring of gas concentrations and respiration rates of strawberries during storage in a lab-scale controlled atmosphere chamber (190 L) and of Pinova apples in a commercial storage facility (170 t). The RMS88 consisted of wireless O2 (0% to 25%) and CO2 sensors (0% to 0.5% and 0% to 5%). The modular respirometer (3.3 L for strawberries and 7.4 L for apples) consisted of a leak-proof arrangement with a water-containing base plate and a glass jar on top. Gas concentrations were continuously recorded by the RMS88 at regular intervals of 1 min for strawberries and 5 min for apples and, in real-time, transferred to a terminal program to calculate respiration rates ( RO2 and RCO2 ) and RQ. Respiration measurement was done in cycles of flushing and measurement period. A respiration measurement cycle with a measurement period of 2 h up to 3 h was shown to be useful for strawberries under air at 10 °C. The start of anaerobic respiration of strawberries due to low O2 concentration (1%) could be recorded in real-time. RO2 and RCO2 of Pinova apples were recorded every 5 min during storage and mean values of 1.6 and 2.7 mL kg−1 h−1, respectively, were obtained when controlled atmosphere (CA) conditions (2% O2, 1.3% CO2 and 2 °C) were established. The modular respirometer was found to be useful for in situ real-time monitoring of respiration rate during storage of fresh produce and offers great potential to be incorporated into RQ-based dynamic CA storage system.

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Growth Height Determination of Tree Walls for Precise Monitoring in Apple Fruit Production Using UAV Photogrammetry

2020, Hobart, Marius, Pflanz, Michael, Weltzien, Cornelia, Schirrmann, Michael

In apple cultivation, spatial information about phenotypic characteristics of tree walls would be beneficial for precise orchard management. Unmanned aerial vehicles (UAVs) can collect 3D structural information of ground surface objects at high resolution in a cost-effective and versatile way by using photogrammetry. The aim of this study is to delineate tree wall height information in an apple orchard applying a low-altitude flight pattern specifically designed for UAVs. This flight pattern implies small distances between the camera sensor and the tree walls when the camera is positioned in an oblique view toward the trees. In this way, it is assured that the depicted tree crown wall area will be largely covered with a larger ground sampling distance than that recorded from a nadir perspective, especially regarding the lower crown sections. Overlapping oblique view images were used to estimate 3D point cloud models by applying structure-from-motion (SfM) methods to calculate tree wall heights from them. The resulting height models were compared with ground-based light detection and ranging (LiDAR) data as reference. It was shown that the tree wall profiles from the UAV point clouds were strongly correlated with the LiDAR point clouds of two years (2018: R2 = 0.83; 2019: R2 = 0.88). However, underestimation of tree wall heights was detected with mean deviations of −0.11 m and −0.18 m for 2018 and 2019, respectively. This is attributed to the weaknesses of the UAV point clouds in resolving the very fine shoots of apple trees. Therefore, the shown approach is suitable for precise orchard management, but it underestimated vertical tree wall expanses, and widened tree gaps need to be accounted for.