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Spatial Distribution Patterns for Identifying Risk Areas Associated with False Smut Disease of Rice in Southern India
False smut disease (FSD) of rice incited by Ustilaginoidea virens is an emerging threat to paddy cultivation worldwide. We investigated the spatial distribution of FSD in different paddy ecosystems of South Indian states, viz., Andhra Pradesh, Karnataka, Tamil Nadu, and Telangana, by considering the exploratory data from 111 sampling sites. Point pattern and surface interpolation analyses were carried out to identify the spatial patterns of FSD across the studied areas. The spatial clusters of FSD were confirmed by employing spatial autocorrelation and Ripley’s K function. Further, ordinary kriging (OK), indicator kriging (IK), and inverse distance weighting (IDW) were used to create spatial maps by predicting the values at unvisited locations. The agglomerative hierarchical cluster analysis using the average linkage method identified four main clusters of FSD. From the Local Moran’s I statistic, most of the areas of Andhra Pradesh and Tamil Nadu were clustered together (at I > 0), except the coastal and interior districts of Karnataka (at I < 0). Spatial patterns of FSD severity were determined by semi-variogram experimental models, and the spherical model was the best fit. Results from the interpolation technique, the potential FSD hot spots/risk areas were majorly identified in Tamil Nadu and a few traditional rice-growing ecosystems of Northern Karnataka. This is the first intensive study that attempted to understand the spatial patterns of FSD using geostatistical approaches in India. The findings from this study would help in setting up ecosystem-specific management strategies to reduce the spread of FSD in India.
Livelihood and climate trade-offs in Kenyan peri-urban vegetable production
Trade-offs between livelihood and environmental outcomes due to agricultural intensification in sub-Saharan Africa are uncertain. The present study measured yield, economic performance and nitrous oxide (N2O) emissions in African indigenous vegetable (AIV) production to investigate the optimal nutrient management strategies. In order to achieve this, an on-farm experiment with four treatments – (1) 40 kg N/ha diammonium phosphate (DAP), (2) 10 t/ha cattle manure, (3) 20 kg N/ha DAP and 5 t/ha cattle manure and (4) a no-N input control – was performed for two seasons. Yields and N2O emissions were directly measured with subsampling and static chambers/gas chromatography, respectively. Economic outcomes were estimated from semi-structured interviews (N = 12). Trade-offs were quantified by calculating N2O emissions intensity (N2OI) and N2O emissions economic intensity (N2OEI). The results indicate that, DAP alone resulted at least 14% greater yields, gross margin and returns to labour in absolute terms but had the highest emissions (p = 0.003). Productivity-climate trade-offs, expressed as N2OI, were statistically similar for DAP and mixed treatments. However, N2OEI was minimized under mixed management (p = 0.0004) while maintaining productivity and gross margins. We therefore conclude that soil fertility management strategies that mix inorganic and organic source present a pathway to sustainable intensification in AIV production. Future studies of GHG emissions in crop production need to consider not only productivity but economic performance when considering trade-offs.
Comparison of Methane Emission Patterns from Dairy Housings with Solid and Slatted Floors at Two Locations
Methane (CH4) emissions from dairy husbandry are a hot topic in the context of active climate protection, where housing systems with slatted floors and slurry storage inside are in general expected to emit more than systems with solid floors. There are multiple factors, including climate conditions, that modulate the emission pattern. In this study, we investigated interrelations between CH4 emission patterns and climate conditions as well as differences between farm locations versus floor effects. We considered three data sets with 265, 264 and 275 hourly emission values from two housing systems (one slatted, one solid floor) in Switzerland and one system with solid floors in Germany. Each data set incorporated measurements in summer, winter and a transition season. The average CH4 emission was highest for the slatted floor system. For the solid floor systems, CH4 emissions at the Swiss location were around 30% higher compared to the German location. The shape of the distributions for the two solid floor systems was rather similar but very different from the distribution for the slatted floor system, which showed higher prevalence for extreme emissions. Rank correlations, which measure the degree of similarity between two rankings in terms of linear relation, were not able to detect dependencies at the selected significance level. In contrast, mutual information, which measures more general statistical dependencies in terms of shared information, revealed highly significant dependencies for almost all variable pairs. The weakest statistical relation was found between winds speed and CH4 emission, but the convection regime was found to play a key role. Clustering was consistent among the three data sets with five typical clusters related to high/low temperature and wind speed, respectively, as well as in some cases to morning and evening hours. Our analysis showed that despite the disparate and often insignificant correlation between environmental variables and CH4 emission, there is a strong relation between both, which shapes the emission pattern in many aspects much more in addition to differences in the floor type. Although a clear distinction of high and low emission condition clusters based on the selected environmental variables was not possible, trends were clearly visible. Further research with larger data sets is advisable to verify the detected trends and enable prognoses for husbandry systems under different climate conditions.
Durable endothelium-mimicking coating for surface bioengineering cardiovascular stents
Mimicking the nitric oxide (NO)-release and glycocalyx functions of native vascular endothelium on cardiovascular stent surfaces has been demonstrated to reduce in-stent restenosis (ISR) effectively. However, the practical performance of such an endothelium-mimicking surfaces is strictly limited by the durability of both NO release and bioactivity of the glycocalyx component. Herein, we present a mussel-inspired amine-bearing adhesive coating able to firmly tether the NO-generating species (e.g., Cu-DOTA coordination complex) and glycocalyx-like component (e.g., heparin) to create a durable endothelium-mimicking surface. The stent surface was firstly coated with polydopamine (pDA), followed by a surface chemical cross-link with polyamine (pAM) to form a durable pAMDA coating. Using a stepwise grafting strategy, Cu-DOTA and heparin were covalently grafted on the pAMDA-coated stent based on carbodiimide chemistry. Owing to both the high chemical stability of the pAMDA coating and covalent immobilization manner of the molecules, this proposed strategy could provide 62.4% bioactivity retention ratio of heparin, meanwhile persistently generate NO at physiological level from 5.9 ± 0.3 to 4.8 ± 0.4 × 10−10 mol cm−2 min−1 in 1 month. As a result, the functionalized vascular stent showed long-term endothelium-mimicking physiological effects on inhibition of thrombosis, inflammation, and intimal hyperplasia, enhanced re-endothelialization, and hence efficiently reduced ISR.
Optical Spectrometry to Determine Nutrient Concentrations and other Physicochemical Parameters in Liquid Organic Manures: A Review
Nutrient concentrations in livestock manures and biogas digestates show a huge variability due to disparities in animal husbandry systems concerning animal species, feed composition, etc. Therefore, a nutrient estimation based on recommendation tables is not reliable when the exact chemical composition is needed. The alternative, to analyse representative fertilizer samples in a standard laboratory, is too time-and cost-intensive to be an accepted routine method for farmers. However, precise knowledge about the actual nutrient concentrations in liquid organic fertilizers is a prerequisite to ensure optimal nutrient supply for growing crops and on the other hand to avoid environmental problems caused by overfertilization. Therefore, spectrometric methods receive increasing attention as fast and low-cost alternatives. This review summarizes the present state of research based on optical spectrometry used at laboratory and field scale for predicting several parameters of liquid organic manures. It emphasizes three categories: (1) physicochemical parameters, e.g., dry matter, pH, and electrical conductivity; (2) main plant nutrients, i.e., total nitrogen, ammonium nitrogen, phosphorus, potassium, magnesium, calcium, and sulfur; and (3) micronutrients, i.e., manganese, iron, copper, and zinc. Furthermore, the commonly used sample preparation techniques, spectrometer types, measuring modes, and chemometric methods are presented. The primarily promising scientific results of the last 30 years contributed to the fact that near-infrared spectrometry (NIRS) was established in commercial laboratories as an alternative method to wet chemical standard methods. Furthermore, companies developed technical setups using NIRS for on-line applications of liquid organic manures. Thus, NIRS seems to have evolved to a competitive measurement procedure, although parts of this technique still need to be improved to ensure sufficient accuracy, especially in quality management.
Identification of representative dairy cattle and fodder crop production typologies at regional scale in Europe
European dairy production faces significant economic, environmental, and social sustainability challenges. Given the great diversity of dairy cattle production systems in Europe, region-specific concepts to improve environmental and socioeconomic sustainability are needed. Regionally integrated dairy cattle-crop systems emerge as a more resilient and sustainable alternative to highly specialized farming systems. Identifying different dairy cattle production typologies and their potential interactions with fodder crop production is presented as a step in transitioning to optimized agricultural systems. Currently existing typologies of integrated systems are often insufficient when characterizing structural, socioeconomic, and environmental components of farms. We fill this gap in the literature by identifying, describing, and comparing representative dairy cattle production system typologies and their interrelation with regional fodder crop production at the European regional scale. This is a necessary step to assess the scope for adapted mitigation and sustainability measures in the future. For this purpose, a multivariate statistical approach is applied. We show how different land-use practices, farm structure characteristics, socio-economic attributes, and emission intensities condition dairy production. Furthermore, the diversity of regional fodder crop production systems is demonstrated by analyzing their distribution in Europe. Together with identified typologies, varying degrees of regional specialization in milk production allow for identifying future strategies associated with the application of integrated systems in key European dairy regions. This study contributes to a better understanding of the existing milk production diversity in Europe and their relationship with regional fodder crop production. In addition, we discuss the benefits of integrated systems as a clear, viable, and resilient alternative to ongoing livestock intensification in the European context. Identifying interactions between components of integrated systems will facilitate decision-making, the design and implementation of measures to mitigate climate change, and the promotion of positive socio-economic and environmental interactions.
Performance of seasonal forecasts for the flowering and veraison of two major Portuguese grapevine varieties
Seasonal phenology forecasts are becoming increasingly demanded by winegrowers and viticulturists. Forecast performance needs to be investigated over space and time before practical applications. We assess seasonal forecast performance (skill, probability and accuracy) in predicting flowering and veraison stages of two representative varieties in Portugal over 1993–2017. The state-of-the-art forecast system ECMWF-SEAS5 provides 7-month seasonal forecasts and is coupled with a locally adapted phenology model. Overall, findings illustrate the dependence of forecast performance on initialization timings, regions and predicting subjects (stages and varieties). Forecast performance improves by delaying the initialization timing and only forecasts initialized on April 1st show better skills than climatology on predicting phenology terciles (early/normal/late). The considerable bias of daily values of seasonal climate predictions can represent the main barrier to accurate forecasts. Better prediction performance is consistently found in Central-Southern regions compared to Northern regions, attributing to an earlier phenology occurrence with a shorter forecast length. Comparable predictive skills between flowering and veraison for both varieties imply better predictability in summer. Consequently, promising seasonal phenology predictions are foreseen in Central-Southern wine regions using forecasts initialized on April 1st with approximately 1–2/3–4 months lead time for flowering/veraison: potential prediction errors are ∼2 weeks, along with an overall moderate forecast skill on categorical events. However, considerable inter-annual variability of forecast performance over the same classified phenology years reflects the substantial influence of climate variability. This may represent the main challenge for reliable forecasts in Mediterranean regions. Recommendations are suggested for methodological innovations and practical applications towards reliable regional phenology forecasts.
Classifying multi-model wheat yield impact response surfaces showing sensitivity to temperature and precipitation change
Crop growth simulation models can differ greatly in their treatment of key processes and hence in their response to environmental conditions. Here, we used an ensemble of 26 process-based wheat models applied at sites across a European transect to compare their sensitivity to changes in temperature (−2 to +9°C) and precipitation (−50 to +50%). Model results were analysed by plotting them as impact response surfaces (IRSs), classifying the IRS patterns of individual model simulations, describing these classes and analysing factors that may explain the major differences in model responses. The model ensemble was used to simulate yields of winter and spring wheat at four sites in Finland, Germany and Spain. Results were plotted as IRSs that show changes in yields relative to the baseline with respect to temperature and precipitation. IRSs of 30-year means and selected extreme years were classified using two approaches describing their pattern. The expert diagnostic approach (EDA) combines two aspects of IRS patterns: location of the maximum yield (nine classes) and strength of the yield response with respect to climate (four classes), resulting in a total of 36 combined classes defined using criteria pre-specified by experts. The statistical diagnostic approach (SDA) groups IRSs by comparing their pattern and magnitude, without attempting to interpret these features. It applies a hierarchical clustering method, grouping response patterns using a distance metric that combines the spatial correlation and Euclidian distance between IRS pairs. The two approaches were used to investigate whether different patterns of yield response could be related to different properties of the crop models, specifically their genealogy, calibration and process description. Although no single model property across a large model ensemble was found to explain the integrated yield response to temperature and precipitation perturbations, the application of the EDA and SDA approaches revealed their capability to distinguish: (i) stronger yield responses to precipitation for winter wheat than spring wheat; (ii) differing strengths of response to climate changes for years with anomalous weather conditions compared to period-average conditions; (iii) the influence of site conditions on yield patterns; (iv) similarities in IRS patterns among models with related genealogy; (v) similarities in IRS patterns for models with simpler process descriptions of root growth and water uptake compared to those with more complex descriptions; and (vi) a closer correspondence of IRS patterns in models using partitioning schemes to represent yield formation than in those using a harvest index. Such results can inform future crop modelling studies that seek to exploit the diversity of multi-model ensembles, by distinguishing ensemble members that span a wide range of responses as well as those that display implausible behaviour or strong mutual similarities.
Particulate Matter Dispersion Modeling in Agricultural Applications: Investigation of a Transient Open Source Solver
Agriculture is a major emitter of particulate matter (PM), which causes health problems and can act as a carrier of the pathogen material that spreads diseases. The aim of this study was to investigate an open-source solver that simulates the transport and dispersion of PM for typical agricultural applications. We investigated a coupled Eulerian–Lagrangian solver within the open source software package OpenFOAM. The continuous phase was solved using transient large eddy simulations, where four different subgrid-scale turbulence models and an inflow turbulence generator were tested. The discrete phase was simulated using two different Lagrangian solvers. For the validation case of a turbulent flow of a street canyon, the flowfield could be recaptured very well, with errors of around 5% for the non-equilibrium turbulence models (WALE and dynamicKeq) in the main regions. The inflow turbulence generator could create a stable and accurate boundary layer for the mean vertical velocity and vertical profile of the turbulent Reynolds stresses R11. The validation of the Lagrangian solver showed mixed results, with partly good agreements (simulation results within the measurement uncertainty), and partly high deviations of up to 80% for the concentration of particles. The higher deviations were attributed to an insufficient turbulence regime of the used validation case, which was an experimental chamber. For the simulation case of PM dispersion from manure application on a field, the solver could capture the influence of features such as size and density on the dispersion. The investigated solver is especially useful for further investigations into time-dependent processes in the near-source area of PM sources.
Investigation on the potential of applying bio-based edible coatings for horticultural products exemplified with cucumbers
Plastic packaging for fresh horticultural produce has many advantages but generates plastic waste and ecological alternatives are required. Edible coatings can retard many processes related to loss of quality. Hydrophobic lipid-based coatings are preferably applied for fresh fruits and vegetables. The approval of such coatings for products with edible peels in EU is increasingly under discussion. However, investigations on the efficiency of various edible coatings on soft-skinned fruit and vegetables are rare and it is currently unclear whether the consumer will accept them. Therefore, this study investigates (1) important characteristics of a lipid-based coating and (2) its ability to maintain the post-harvest quality of fresh cucumbers. This was evaluated by a comparative storage test under common suboptimal retail conditions (20 °C; 65% RH). The study also evaluates (3) the general perception of consumers about and their acceptance of the application of edible coatings on fresh fruit and vegetables with edible peels. The investigated coating was able to drastically reduce water loss (54–68%) and fruit respiration (approx. 33%) of fresh cucumber. The reduction of tissue stiffness was delayed by 2 days, thus, prolonged shelf life. Majority of consumer (77%) endorse the application of edible coatings as an alternative to plastic packaging, but emphasized important requirements for them.