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End date: 2014 × Start date: 2014 × Version: submittedVersion ×

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    Error estimates for nonlinear reaction-diffusion systems involving different diffusion length scales
    (Berlin : Weierstraß-Institut für Angewandte Analysis und Stochastik, 2014) Reichelt, Sina
    We derive quantitative error estimates for coupled reaction-diffusion systems, whose coefficient functions are quasi-periodically oscillating modeling microstructure of the underlying macroscopic domain. The coupling arises via nonlinear reaction terms, and we allow for different diffusion length scales, i.e. whereas some species have characteristic diffusion length of order 1, other species may diffuse much slower, namely, with order of the characteristic microstructure-length scale. We consider an effective system, which is rigorously obtained via two-scale convergence, and we prove that the error of its solution to the original solution is of order 1/2.
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    Hausdorff metric BV discontinuity of sweeping processes
    (Berlin : Weierstraß-Institut für Angewandte Analysis und Stochastik, 2014) Klein, Olaf; Recupero, Vincenzo
    Sweeping processes are a class of evolution differential inclusions arising in elastoplasticity and were introduced by J.J. Moreau in the early seventies. The solution operator of the sweeping processes represents a relevant example of emphrate independent operator containing as a particular case the so called emphplay operator which is widely used in hysteresis. The continuity properties of these operators were studied in several works. In this note we address the continuity with respect to the strict metric in the space of functions of bounded variation with values in the metric space of closed convex subsets of a Hilbert space. We provide a counterexample showing that the solution operator of the sweeping process is not continuous when its domain is endowed with the strict topology of BV and its codomain is endowed with the L1-topology. This is at variance with the case of the play operator which instead is continuous in this sense.
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    Influence of cell shape, inhomogeneities and diffusion barriers in cell polarization models
    (Berlin : Weierstraß-Institut für Angewandte Analysis und Stochastik, 2014) Giese, Wolfgang; Eigel, Martin; Westerheide, Sebastian; Engwer, Christian; Klipp, Edda
    In silico experiments bear the potential to further the understanding of biological transport processes by allowing a systematic modification of any spatial property and providing immediate simulation results for the chosen models. We consider cell polarization and spatial reorganization of membrane proteins which are fundamental for cell division, chemotaxis and morphogenesis. Our computational study is motivated by mating and budding processes of S. cerevisiae. In these processes a key player during the initial phase of polarization is the GTPase Cdc42 which occurs in an active membrane-bound form and an inactive cytosolic form. We use partial differential equations to describe the membrane-cytosol shuttling of Cdc42 during budding as well as mating of yeast. The membrane is modeled as a thin layer that only allows lateral diffusion and the cytosol is modeled as a volume. We investigate how cell shape and diffusion barriers like septin structures or bud scars influence Cdc42 cluster formation and subsequent polarization of the yeast cell. Since the details of the binding kinetics of cytosolic proteins to the membrane are still controversial, we employ two conceptual models which assume different binding kinetics. An extensive set of in silico experiments with different modeling hypotheses illustrate the qualitative dependence of cell polarization on local membrane curvature, cell size and inhomogeneities on the membrane and in the cytosol. We examine that spatial inhomogenities essentially determine the location of Cdc42 cluster formation and spatial properties are crucial for the realistic description of the polarization process in cells. In particular, our computer simulations suggest that diffusion barriers are essential for the yeast cell to grow a protrusion.
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    Robust homoclinic orbits in planar systems with Preisach hysteresis operator
    (Berlin : Weierstraß-Institut für Angewandte Analysis und Stochastik, 2014) Pimenov, Alexander; Rachinskii, Dmitrii
    We construct examples of robust homoclinic orbits for systems of ordinary differential equations coupled with the Preisach hysteresis operator. Existence of such orbits is demonstrated for the first time. We discuss a generic mechanism that creates robust homoclinic orbits and a method for finding them. An example of a homoclinic orbit in a population dynamics model with hysteretic response of the prey to variations of the predator is studied numerically.