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- ItemEstimating Canopy Parameters Based on the Stem Position in Apple Trees Using a 2D LiDAR(Basel : MDPI AG, 2019) Tsoulias, Nikos; Paraforos, Dimitrios S.; Fountas, Spyros; Zude-Sasse, ManuelaData of canopy morphology are crucial for cultivation tasks within orchards. In this study, a 2D light detection and range (LiDAR) laser scanner system was mounted on a tractor, tested on a box with known dimensions (1.81 m × 0.6 m × 0.6 m), and applied in an apple orchard to obtain the 3D structural parameters of the trees (n = 224). The analysis of a metal box which considered the height of four sides resulted in a mean absolute error (MAE) of 8.18 mm with a bias (MBE) of 2.75 mm, representing a root mean square error (RMSE) of 1.63% due to gaps in the point cloud and increased incident angle with enhanced distance between laser aperture and the object. A methodology based on a bivariate point density histogram is proposed to estimate the stem position of each tree. The cylindrical boundary was projected around the estimated stem positions to segment each individual tree. Subsequently, height, stem diameter, and volume of the segmented tree point clouds were estimated and compared with manual measurements. The estimated stem position of each tree was defined using a real time kinematic global navigation satellite system, (RTK-GNSS) resulting in an MAE and MBE of 33.7 mm and 36.5 mm, respectively. The coefficient of determination (R2) considering manual measurements and estimated data from the segmented point clouds appeared high with, respectively, R2 and RMSE of 0.87 and 5.71% for height, 0.88 and 2.23% for stem diameter, as well as 0.77 and 4.64% for canopy volume. Since a certain error for the height and volume measured manually can be assumed, the LiDAR approach provides an alternative to manual readings with the advantage of getting tree individual data of the entire orchard.
- ItemExpressing stemflow commensurate with its ecohydrological importance(Amsterdam [u.a.] : Elsevier Science, 2018) Carlyle-Moses, Darryl E.; Iida, Shin'ichi; Germer, Sonja; Llorens, Pilar; Michalzik, Beate; Nanko, Kazuki; Tischer, Alexander; Levia, Delphis F.Despite some progress, the importance of stemflow remains obscured partly due to computations emphasizing canopy interception loss. We advocate for two metrics—the stand-scale funneling ratio and the stand-scale infiltration funneling ratio—to more accurately portray stemflow inputs and increase comparability across ecosystems. These metrics yield per unit area stemflow inputs orders of magnitude greater than what would have been delivered by throughfall or precipitation alone. We recommend that future studies employ these stand-scale funnelling metrics to express stemflow commensurate with its ecohydrological importance and better conceptualize the role of stemflow in plant-soil interactions, permitting advances in critical zone science. © 2018 The Authors
- ItemAn alternative to field retting: Fibrous materials based on wet preserved hemp for the manufacture of composites(Basel : MDPI AG, 2019) Gusovius, H.-J.; Lühr, C.; Hoffmann, T.; Pecenka, R.; Idler, C.A process developed at the Leibniz Institute for Agricultural Engineering and Bioeconomy (ATB) for the supply and processing of wet-preserved fiber plants opens up new potential uses for such resources. The processing of industrial hemp into fiber materials and products thereof is undergoing experimental research along the value-added chain from the growing process through to the manufacturing of product samples. The process comprises the direct harvesting of the field-fresh hemp and the subsequent anaerobic storage of the entire plant material. Thus, process risk due to unfavorable weather conditions is prevented in contrast to common dew retting procedures. The effects of the anaerobic storage processes on the properties of the bast part of the plant material are comparable to the results of common retting procedures. Harvest storage, as well as further mechanical processing, leads to different geometrical properties compared to the bast fibers resulting from traditional post harvesting treatment and decortication. The fiber raw material obtained in this way is well suited to the production of fiberboards and the reinforcement of polymer or mineral bonded composites. The objective of this paper is to present recent research results on final products extended by a comprehensive overview of the whole supply chain in order to enable further understanding of the result influencing aspects of prior process steps.
- ItemMilk fatty acids estimated by mid-infrared spectroscopy and milk yield can predict methane emissions in dairy cows(Berlin ; Heidelberg : Springer, 2018-5-2) Engelke, Stefanie W.; Daş, Gürbüz; Derno, Michael; Tuchscherer, Armin; Berg, Werner; Kuhla, Björn; Metges, Cornelia C.Ruminant enteric methane emission contributes to global warming. Although breeding low methane-emitting cows appears to be possible through genetic selection, doing so requires methane emission quantification by using elaborate instrumentation (respiration chambers, SF6 technique, GreenFeed) not feasible on a large scale. It has been suggested that milk fatty acids are promising markers of methane production. We hypothesized that methane emission can be predicted from the milk fatty acid concentrations determined by mid-infrared spectroscopy, and the integration of energy-corrected milk yield would improve the prediction. Therefore, we examined relationships between methane emission of cows measured in respiration chambers and milk fatty acids, predicted by mid-infrared spectroscopy, to derive diet-specific and general prediction equations based on milk fatty acid concentrations alone and with the additional consideration of energy-corrected milk yield. Cows were fed diets differing in forage type and linseed supplementation to generate a large variation in both CH4 emission and milk fatty acids. Depending on the diet, equations derived from regression analysis explained 61 to 96% of variation of methane emission, implying the potential of milk fatty acid data predicted by mid-infrared spectroscopy as novel proxy for direct methane emission measurements. When data from all diets were analyzed collectively, the equation with energy-corrected milk yield (CH4 (L/day) = − 1364 + 9.58 × energy-corrected milk yield + 18.5 × saturated fatty acids + 32.4 × C18:0) showed an improved coefficient of determination of cross-validation R2 CV = 0.72 compared to an equation without energy-corrected milk yield (R2 CV = 0.61). Equations developed for diets supplemented by linseed showed a lower R2 CV as compared to diets without linseed (0.39 to 0.58 vs. 0.50 to 0.91). We demonstrate for the first time that milk fatty acid concentrations predicted by mid-infrared spectroscopy together with energy-corrected milk yield can be used to estimate enteric methane emission in dairy cows. © 2018, The Author(s).
- ItemEffect of densification variables on water resistance of corn cob briquettes(Tartu : Eesti Pollumajandusulikool, 2019) Orisaleye, J.I.; Jekayinfa, S.O.; Pecenka, R.; Onifade, T.B.Solid biofuels can be used in heat and power generation applications. The utilization of agricultural residues for this purpose would be of immense benefit to rural communities of developing countries where the resource is being produced. Water resistance is a crucial property for transport and storage of biomass briquettes under moist climate conditions. In this study, the effect of process and material variables on the water resistance property of corn cob briquettes was investigated. The water resistance of briquettes produced ranged between 32.6 and 94.8% for die temperature between 90 °C and 120 °C, hold time from 7.5 to 15 minutes and die pressures between 9 and 15 MPa. A higher die temperature resulted in an increase in the water resistance of the biomass briquettes. Also, increasing the hold time improved the water resistance of the briquettes. Using a particle size less than 2.5 mm resulted in higher briquette water resistance property compared to briquettes produced from particle sizes greater than 2.5 mm. It was also shown that the effect of the interaction of the temperature with particle size on the water resistance of corn cob briquettes was statistically significant (p < 0.05). © 2019, Eesti Pollumajandusulikool. All rights reserved.
- ItemHydrothermal Carbonization and Pyrolysis of Sewage Sludge: Effects on Lolium perenne Germination and Growth(Basel : MDPI, 2019) Paneque, Marina; Knicker, Heike; Kern, Jürgen; De la Rosa, José MaríaThe pyrolysis and hydrothermal carbonization (HTC) of sewage sludge (SS) resulted in products free of pathogens, with the potential for being used as soil amendment. With this work, we evaluated the impact of dry pyrolysis-treated (600 °C, 1 h) and HTC-treated (200 °C, 260 °C; 0.5 h, 3 h) SS on the germination, survival, and growth of Lolium perenne during an 80 day greenhouse experiment. Therefore, the hydrochars and pyrochars were amended to a Calcic Cambisol at doses of 5 and 25 t ha−1. The addition of sludge pyrochars to the Cambisol did not affect Lolium germination, survival rates or plant yields. However, the use 25 t ha−1 of wood biochar reduced germination and survival rates, which may be related to the low N availability of this sample. In comparison to the control, higher or equal plant biomass was produced in the hydrochar-amended pots, even though some hydrochars decreased plant germination and survival rates. Among all the evaluated char properties, only the organic and inorganic N contents of the chars, along with their organic C values, positively correlated with total and shoot biomass production. Our work demonstrates the N fertilization potential of the hydrochar produced at low temperature, whereas the hydrochar produced at 260 °C and the pyrochars were less efficient with respect to plant yields.
- ItemHeat stress risk in European dairy cattle husbandry under different climate change scenarios – uncertainties and potential impacts(Göttingen : Copernicus, 2019) Hempel, Sabrina; Menz, Christoph; Pinto, Severino; Galán, Elena; Janke, David; Estellés, Fernando; Müschner-Siemens, Theresa; Wang, Xiaoshuai; Heinicke, Julia; Zhang, Guoqiang; Amon, Barbara; del Prado, Agustín; Amon, ThomasIn the last decades, a global warming trend was observed. Along with the temperature increase, modifications in the humidity and wind regime amplify the regional and local impacts on livestock husbandry. Direct impacts include the occurrence of climatic stress conditions. In Europe, cows are economically highly relevant and are mainly kept in naturally ventilated buildings that are most susceptible to climate change. The high-yielding cows are particularly vulnerable to heat stress. Modifications in housing management are the main measures taken to improve the ability of livestock to cope with these conditions. Measures are typically taken in direct reaction to uncomfortable conditions instead of in anticipation of a long-term risk for climatic stress. Measures that balance welfare, environmental and economic issues are barely investigated in the context of climate change and are thus almost not available for commercial farms. Quantitative analysis of the climate change impacts on animal welfare and linked economic and environmental factors is rare. Therefore, we used a numerical modeling approach to estimate the future heat stress risk in such dairy cattle husbandry systems. The indoor climate was monitored inside three reference barns in central Europe and the Mediterranean regions. An artificial neuronal network (ANN) was trained to relate the outdoor weather conditions provided by official meteorological weather stations to the measured indoor microclimate. Subsequently, this ANN model was driven by an ensemble of regional climate model projections with three different greenhouse gas concentration scenarios. For the evaluation of the heat stress risk, we considered the number and duration of heat stress events. Based on the changes in the heat stress events, various economic and environmental impacts were estimated. The impacts of the projected increase in heat stress risk varied among the barns due to different locations and designs as well as the anticipated climate change (considering different climate models and future greenhouse gas concentrations). There was an overall increasing trend in number and duration of heat stress events. At the end of the century, the number of annual stress events can be expected to increase by up to 2000, while the average duration of the events increases by up to 22 h compared to the end of the last century. This implies strong impacts on economics, environment and animal welfare and an urgent need for mid-term adaptation strategies. We anticipated that up to one-tenth of all hours of a year, correspondingly one-third of all days, will be classified as critical heat stress conditions. Due to heat stress, milk yield may decrease by about 2.8 % relative to the present European milk yield, and farmers may expect financial losses in the summer season of about 5.4 % of their monthly income. In addition, an increasing demand for emission reduction measures must be expected, as an emission increase of about 16 Gg of ammonia and 0.1 Gg of methane per year can be expected under the anticipated heat stress conditions. The cattle respiration rate increases by up to 60 %, and the standing time may be prolonged by 1 h. This causes health issues and increases the probability of medical treatments. The various impacts imply feedback loops in the climate system which are presently underexplored. Hence, future in-depth studies on the different impacts and adaptation options at different stress levels are highly recommended.
- ItemCharacterization of Bathyarchaeota genomes assembled from metagenomes of biofilms residing in mesophilic and thermophilic biogas reactors(London : BioMed Central Ltd., 2018) Maus, I.; Rumming, M.; Bergmann, I.; Heeg, K.; Pohl, M.; Nettmann, E.; Jaenicke, S.; Blom, J.; Pühler, A.; Schlüter, A.; Sczyrba, A.; Klocke, M.Background: Previous studies on the Miscellaneous Crenarchaeota Group, recently assigned to the novel archaeal phylum Bathyarchaeota, reported on the dominance of these Archaea within the anaerobic carbohydrate cycle performed by the deep marine biosphere. For the first time, members of this phylum were identified also in mesophilic and thermophilic biogas-forming biofilms and characterized in detail. Results: Metagenome shotgun libraries of biofilm microbiomes were sequenced using the Illumina MiSeq system. Taxonomic classification revealed that between 0.1 and 2% of all classified sequences were assigned to Bathyarchaeota. Individual metagenome assemblies followed by genome binning resulted in the reconstruction of five metagenome-assembled genomes (MAGs) of Bathyarchaeota. MAGs were estimated to be 65-92% complete, ranging in their genome sizes from 1.1 to 2.0 Mb. Phylogenetic classification based on core gene sets confirmed their placement within the phylum Bathyarchaeota clustering as a separate group diverging from most of the recently known Bathyarchaeota clusters. The genetic repertoire of these MAGs indicated an energy metabolism based on carbohydrate and amino acid fermentation featuring the potential for extracellular hydrolysis of cellulose, cellobiose as well as proteins. In addition, corresponding transporter systems were identified. Furthermore, genes encoding enzymes for the utilization of carbon monoxide and/or carbon dioxide via the Wood-Ljungdahl pathway were detected. Conclusions: For the members of Bathyarchaeota detected in the biofilm microbiomes, a hydrolytic lifestyle is proposed. This is the first study indicating that Bathyarchaeota members contribute presumably to hydrolysis and subsequent fermentation of organic substrates within biotechnological biogas production processes.
- ItemAssessing the organic fraction of municipal solid wastes for the production of lactic acid(Amsterdam [u.a.] : Elsevier, 2019) López-Gómez, J. Pablo; Latorre-Sánchez, Marcos; Unger, Peter; Schneider, Roland; Coll Lozano, Caterina; Venus, JoachimWith an estimated yearly production of about 140 Mt in the EU, conventionally, the organic fraction of municipal solid wastes (OFMSW) has been disposed in landfills with negative environmental effects. Nonetheless, the chemical composition of this residue make it a substrate with great bioconversion potential. In this study, OFMSW from Spanish municipal treatment plants, were evaluated for the production of LA. Samples were identified according to the sorting mechanisms employed for their collection in: (A) separately collected, (B) non-separately collected and (C) separately collected+paper/cardboard. Enzymatic hydrolysis was used to produce hydrolysates A, B and C accordingly. Hydrolysate A showed the highest total sugars and glucose content with values of 70 and 55 g·L−1, respectively. Following the characterisation, a screening showed that growth of B. coagulans was possible in all three hydrolysates. Furthermore, lab scale fermentations showed that LA final concentrations could reach around 60 g·L−1, with yields from total sugars of above 0.60 g·g−1. A technical scale fermentation of the hydrolysate A resulted in a final LA concentration of 60.7 g·L−1, a yield of 0.71 g·g−1 with a productivity of 2.68 g·L−1·h−1. Overall, it was estimated that 0.23 g of LA could be produced from one g of dry OFMSW.
- ItemRapid determination of lime requirement by mid-infrared spectroscopy: A promising approach for precision agriculture(Weinheim : Wiley-VCH, 2019) Leenen, Matthias; Welp, Gerhard; Gebbers, Robin; Pätzold, StefanMid-infrared spectroscopy (MIRS) has proven to be a cost-effective, high throughput measurement technique for soil analysis. After multivariate calibration mid-infrared spectra can be used to predict various soil properties, some of which are related to lime requirement (LR). The objective of this study was to test the performance of MIRS for recommending variable rate liming on typical Central European soils in view of precision agriculture applications. In Germany, LR of arable topsoils is commonly derived from the parameters organic matter content (SOM), clay content, and soil pH (CaCl2) as recommended by the Association of German Agricultural Analytical and Research Institutes (VDLUFA). We analysed a total of 458 samples from six locations across Germany, which all revealed large within-field soil heterogeneity. Calcareous topsoils were observed at some positions of three locations (79 samples). To exclude such samples from LR determination, peak height at 2513 cm−1 of the MIR spectrum was used for identification. Spectra-based identification was accurate for carbonate contents > 0.5%. Subsequent LR derivation (LRSPP) from MIRS-PLSR predictions of SOM, clay, and pH (CaCl2) for non-calcareous soil samples using the VDLUFA look-up tables was successful for all locations (R2 = 0.54–0.82; RMSE = 857–1414 kg CaO ha−1). Alternatively, we tested direct LR prediction (LRDP) by MIRS-PLSR and also achieved satisfactory performance (R2 = 0.52–0.77; RMSE = 811–1420 kg CaO ha−1; RPD = 1.44–2.08). Further improvement was achieved by refining the VDLUFA tables towards a stepless algorithm. It can be concluded that MIRS provides a promising approach for precise LR estimation on heterogeneous arable fields. Large sample numbers can be processed with low effort which is an essential prerequisite for variable rate liming in precision agriculture. © 2019 The Authors. Journal of Plant Nutrition and Soil Science published by WILEY-VCH Verlag GmbH & Co. KGaA