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    Near Real-Time Biophysical Rice (Oryza sativa L.) Yield Estimation to Support Crop Insurance Implementation in India
    (Basel : MDPI, 2020) Arumugam, Ponraj; Chemura, Abel; Schauberger, Bernhard; Gornott, Christoph
    Immediate yield loss information is required to trigger crop insurance payouts, which are important to secure agricultural income stability for millions of smallholder farmers. Techniques for monitoring crop growth in real-time and at 5 km spatial resolution may also aid in designing price interventions or storage strategies for domestic production. In India, the current government-backed PMFBY (Pradhan Mantri Fasal Bima Yojana) insurance scheme is seeking such technologies to enable cost-efficient insurance premiums for Indian farmers. In this study, we used the Decision Support System for Agrotechnology Transfer (DSSAT) to estimate yield and yield anomalies at 5 km spatial resolution for Kharif rice (Oryza sativa L.) over India between 2001 and 2017. We calibrated the model using publicly available data: namely, gridded weather data, nutrient applications, sowing dates, crop mask, irrigation information, and genetic coefficients of staple varieties. The model performance over the model calibration years (2001–2015) was exceptionally good, with 13 of 15 years achieving more than 0.7 correlation coefficient (r), and more than half of the years with above 0.75 correlation with observed yields. Around 52% (67%) of the districts obtained a relative Root Mean Square Error (rRMSE) of less than 20% (25%) after calibration in the major rice-growing districts (>25% area under cultivation). An out-of-sample validation of the calibrated model in Kharif seasons 2016 and 2017 resulted in differences between state-wise observed and simulated yield anomalies from –16% to 20%. Overall, the good ability of the model in the simulations of rice yield indicates that the model is applicable in selected states of India, and its outputs are useful as a yield loss assessment index for the crop insurance scheme PMFBY.
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    Incorporating Biodiversity into Biogeochemistry Models to Improve Prediction of Ecosystem Services in Temperate Grasslands: Review and Roadmap
    (Basel : MDPI, 2020) Van Oijen, Marcel; Barcza, Zoltán; Confalonieri, Roberto; Korhonen, Panu; Kröel-Dulay, György; Lellei-Kovács, Eszter; Louarn, Gaëtan; Louault, Frédérique; Martin, Raphaël; Moulin, Thibault; Movedi, Ermes; Picon-Cochard, Catherine; Rolinski, Susanne; Viovy, Nicolas; Wirth, Stephen Björn; Bellocchi, Gianni
    Multi-species grasslands are reservoirs of biodiversity and provide multiple ecosystem services, including fodder production and carbon sequestration. The provision of these services depends on the control exerted on the biogeochemistry and plant diversity of the system by the interplay of biotic and abiotic factors, e.g., grazing or mowing intensity. Biogeochemical models incorporate a mechanistic view of the functioning of grasslands and provide a sound basis for studying the underlying processes. However, in these models, the simulation of biogeochemical cycles is generally not coupled to simulation of plant species dynamics, which leads to considerable uncertainty about the quality of predictions. Ecological models, on the other hand, do account for biodiversity with approaches adopted from plant demography, but without linking the dynamics of plant species to the biogeochemical processes occurring at the community level, and this hampers the models’ capacity to assess resilience against abiotic stresses such as drought and nutrient limitation. While setting out the state-of-the-art developments of biogeochemical and ecological modelling, we explore and highlight the role of plant diversity in the regulation of the ecosystem processes underlying the ecosystems services provided by multi-species grasslands. An extensive literature and model survey was carried out with an emphasis on technically advanced models reconciling biogeochemistry and biodiversity, which are readily applicable to managed grasslands in temperate latitudes. We propose a roadmap of promising developments in modelling.
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    Simultaneous Calibration of Grapevine Phenology and Yield with a Soil–Plant–Atmosphere System Model Using the Frequentist Method
    (Basel : MDPI, 2021-8-20) Yang, Chenyao; Menz, Christoph; Fraga, Helder; Reis, Samuel; Machado, Nelson; Malheiro, Aureliano C.; Santos, João A.
    Reliable estimations of parameter values and associated uncertainties are crucial for crop model applications in agro-environmental research. However, estimating many parameters simultaneously for different types of response variables is difficult. This becomes more complicated for grapevines with different phenotypes between varieties and training systems. Our study aims to evaluate how a standard least square approach can be used to calibrate a complex grapevine model for simulating both the phenology (flowering and harvest date) and yield of four different variety–training systems in the Douro Demarcated Region, northern Portugal. An objective function is defined to search for the best-fit parameters that result in the minimum value of the unweighted sum of the normalized Root Mean Squared Error (nRMSE) of the studied variables. Parameter uncertainties are estimated as how a given parameter value can determine the total prediction variability caused by variations in the other parameter combinations. The results indicate that the best-estimated parameters show a satisfactory predictive performance, with a mean bias of −2 to 4 days for phenology and −232 to 159 kg/ha for yield. The corresponding variance in the observed data was generally well reproduced, except for one occasion. These parameters are a good trade-off to achieve results close to the best possible fit of each response variable. No parameter combinations can achieve minimum errors simultaneously for phenology and yield, where the best fit to one variable can lead to a poor fit to another. The proposed parameter uncertainty analysis is particularly useful to select the best-fit parameter values when several choices with equal performance occur. A global sensitivity analysis is applied where the fruit-setting parameters are identified as key determinants for yield simulations. Overall, the approach (including uncertainty analysis) is relatively simple and straightforward without specific pre-conditions (e.g., model continuity), which can be easily applied for other models and crops. However, a challenge has been identified, which is associated with the appropriate assumption of the model errors, where a combination of various calibration approaches might be essential to have a more robust parameter estimation.
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    Analysis of Olive Grove Destruction by Xylella fastidiosa Bacterium on the Land Surface Temperature in Salento Detected Using Satellite Images
    (Basel : MDPI, 2021-9-16) Semeraro, Teodoro; Buccolieri, Riccardo; Vergine, Marzia; De Bellis, Luigi; Luvisi, Andrea; Emmanuel, Rohinton; Marwan, Norbert
    Agricultural activity replaces natural vegetation with cultivated land and it is a major cause of local and global climate change. Highly specialized agricultural production leads to extensive monoculture farming with a low biodiversity that may cause low landscape resilience. This is the case on the Salento peninsula, in the Apulia Region of Italy, where the Xylella fastidiosa bacterium has caused the mass destruction of olive trees, many of them in monumental groves. The historical land cover that characterized the landscape is currently in a transition phase and can strongly affect climate conditions. This study aims to analyze how the destruction of olive groves by X. fastidiosa affects local climate change. Land surface temperature (LST) data detected by Landsat 8 and MODIS satellites are used as a proxies for microclimate mitigation ecosystem services linked to the evolution of the land cover. Moreover, recurrence quantification analysis was applied to the study of LST evolution. The results showed that olive groves are the least capable forest type for mitigating LST, but they are more capable than farmland, above all in the summer when the air temperature is the highest. The differences in the average LST from 2014 to 2020 between olive groves and farmland ranges from 2.8 °C to 0.8 °C. Furthermore, the recurrence analysis showed that X. fastidiosa was rapidly changing the LST of the olive groves into values to those of farmland, with a difference in LST reduced to less than a third from the time when the bacterium was identified in Apulia six years ago. The change generated by X. fastidiosa started in 2009 and showed more or less constant behavior after 2010 without substantial variation; therefore, this can serve as the index of a static situation, which can indicate non-recovery or non-transformation of the dying olive groves. Failure to restore the initial environmental conditions can be connected with the slow progress of the uprooting and replacing infected plants, probably due to attempts to save the historic aspect of the landscape by looking for solutions that avoid uprooting the diseased plants. This suggests that social-ecological systems have to be more responsive to phytosanitary epidemics and adapt to ecological processes, which cannot always be easily controlled, to produce more resilient landscapes and avoid unwanted transformations.