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- ItemDeveloping a Laser Induced Liquid Beam Ion Desorption Spectral Database as Reference for Spaceborne Mass Spectrometers(Malden, Mass. : American Geophysical Union, 2022) Klenner, Fabian; Umair, Muhammad; Walter, Sebastian H. G.; Khawaja, Nozair; Hillier, Jon; Nölle, Lenz; Zou, Zenghui; Napoleoni, Maryse; Sanderink, Arnaud; Zuschneid, Wilhelm; Abel, Bernd; Postberg, FrankSpaceborne impact ionization mass spectrometers, such as the Cosmic Dust Analyzer on board the past Cassini spacecraft or the SUrface Dust Analyzer being built for NASA's upcoming Europa Clipper mission, are of crucial importance for the exploration of icy moons in the Solar System, such as Saturn's moon Enceladus or Jupiter's moon Europa. For the interpretation of data produced by these instruments, analogue experiments on Earth are essential. To date, thousands of laboratory mass spectra have been recorded with an analogue experiment for impact ionization mass spectrometers. Simulation of mass spectra of ice grains in space is achieved by a Laser Induced Liquid Beam Ion Desorption (LILBID) approach. The desorbed cations or anions are analyzed in a time-of-flight mass spectrometer. The amount of unstructured raw data is increasingly challenging to sort, process, interpret and compare with data from space. Thus far this has been achieved manually for individual mass spectra because no database containing the recorded reference spectra was available. Here we describe the development of a comprehensive, extendable database containing cation and anion mass spectra from the laboratory LILBID facility. The database is based on a Relational Database Management System with a web server interface and enables filtering of the laboratory data using a wide range of parameters. The mass spectra can be compared not only with data from past and future space missions but also mass spectral data generated by other, terrestrial, techniques. The validated and approved subset of the database is available for general public (https://lilbid-db.planet.fu-berlin.de).
- ItemCurvature model for nanoparticle size effects on peptide fibril stability and molecular dynamics simulation data(Amsterdam [u.a.] : Elsevier, 2022) John, Torsten; Martin, Lisandra L.; Risselada, Herre Jelger; Abel, BerndNanostructured surfaces are widespread in nature and are being further developed in materials science. This makes them highly relevant for biomolecules, such as peptides. In this data article, we present a curvature model and molecular dynamics (MD) simulation data on the influence of nanoparticle size on the stability of amyloid peptide fibrils related to our research article entitled “Mechanistic insights into the size-dependent effects of nanoparticles on inhibiting and accelerating amyloid fibril formation” (John et al., 2022) [1]. We provide the code to perform MD simulations in GROMACS 4.5.7 software of arbitrarily chosen biomolecule oligomers adsorbed on a curved surface of chosen nanoparticle size. We also provide the simulation parameters and data for peptide oligomers of Aß40, NNFGAIL, GNNQQNY, and VQIYVK. The data provided allows researchers to further analyze our MD simulations and the curvature model allows for a better understanding of oligomeric structures on surfaces.
- ItemCryo-printed microfluidics enable rapid prototyping for optical-cell analysis(Heidelberg : Springer, 2022) Garmasukis, Rokas; Hackl, Claudia; Dusny, Christian; Elsner, Christian; Charvat, Ales; Schmid, Andreas; Abel, BerndThis paper highlights an innovative, low-cost rapid-prototyping method for generating microfluidic chips with extraordinary short fabrication times of only a few minutes. Microchannels and inlet/outlet ports are created by controlled deposition of aqueous microdroplets on a cooled surface resulting in printed ice microstructures, which are in turn coated with a UV-curable acrylic cover layer. Thawing leaves an inverse imprint as a microchannel structure. For an exemplary case, we applied this technology for creating a microfluidic chip for cell-customized optical-cell analysis. The chip design includes containers for cell cultivation and analysis. Container shape, length, position, and angle relative to the main channel were iteratively optimized to cultivate and analyze different cell types. With the chip, we performed physiological analyses of morphologically distinct prokaryotic Corynebacterium glutamicum DM1919, eukaryotic Hansenula polymorpha RB11 MOX-GFP, and phototrophic Synechocystis sp. PCC 6803 cells via quantitative time-lapse fluorescence microscopy. The technology is not limited to rapid prototyping of complex biocompatible microfluidics. Further exploration may include printing with different materials other than water, printing on other substrates in-situ biofunctionalization, the inclusion of electrodes and many other applications.
- ItemTarget ion and neutral spread in high power impulse magnetron sputtering(New York, NY : Inst., 2022) Hajihoseini, H.; Brenning, N.; Rudolph, M.; Raadu, M.A.; Lundin, D.; Fischer, J.; Minea, T. M.; Gudmundsson, J.T.In magnetron sputtering, only a fraction of the sputtered target material leaving the ionization region is directed toward the substrate. This fraction may be different for ions and neutrals of the target material as the neutrals and ions can exhibit a different spread as they travel from the target surface toward the substrate. This difference can be significant in high power impulse magnetron sputtering (HiPIMS) where a substantial fraction of the sputtered material is known to be ionized. Geometrical factors or transport parameters that account for the loss of produced film-forming species to the chamber walls are needed for experimental characterization and modeling of the magnetron sputtering discharge. Here, we experimentally determine transport parameters for ions and neutral atoms in a HiPIMS discharge with a titanium target for various magnet configurations. Transport parameters are determined to a typical substrate, with the same diameter (100 mm) as the cathode target, and located at a distance 70 mm from the target surface. As the magnet configuration and/or the discharge current are changed, the transport parameter for neutral atoms ζ tn remains roughly the same, while transport parameters for ions ζ ti vary greatly. Furthermore, the relative ion-to-neutral transport factors, ζ ti / ζ tn, that describe the relative deposited fractions of target material ions and neutrals onto the substrate, are determined to be in the range from 0.4 to 1.1.
- ItemInvestigating the morphology of bulk heterojunctions by laser photoemission electron microscopy(Amsterdam [u.a.] : Elsevier Science, 2022) Niefind, Falk; Shivhare, Rishi; Mannsfeld, Stefan C.B.; Abel, Bernd; Hambsch, MikeThe nanoscale morphology of bulk heterojunctions is highly important for the charge dissociation and transport in organic solar cells and ultimately defines the performance of the cell. The visualization of this nano-morphology in terms of domain size and polymer orientation in a fast and straightforward way is therefore of great interest to evaluate the suitability of a film for efficient solar cells. Here, we demonstrate that the morphology of different blends of poly(3-hexylthiophene-2,5-diyl) (P3HT) and phenyl-C61-butyric acid methyl ester (PCBM) can be imaged and analyzed by employing photoemission electron microscopy.
- ItemAsh transformation mechanism during combustion of rice husk and rice straw(New York, NY [u.a.] : Elsevier, 2022) Beidaghy Dizaji, Hossein; Zeng, Thomas; Hölzig, Hieronymus; Bauer, Jens; Klöß, Gert; Enke, DirkBiomass is an alternative energy resource to fossil fuels because of its potential to reduce greenhouse gas emissions. However, ash-related problems are serious obstacles for this development, especially for the use in combustion plants. Thus, design and operation of biomass boilers require detailed understanding of ash transformation reactions during thermochemical conversion. To evaluate ash transformation in silica-rich biomass fuels, rice husk and rice straw were selected because of their abundance, limited utilization conflicts with the food sector, as well as their potential in both energy and material applications. This paper reveals ash transformation mechanisms relevant for the ash melting behaviour of silica-rich biomass fuels considering chemical and phase composition of the ashes. In this regard, several advanced spectroscopic methods and diffractometry were employed to characterize the materials. The ash transformation reactions and the viscosity were simulated using thermodynamic equilibrium calculations and a slag viscosity modeling toolbox. The results illustrate the impact of impurities on the atomic structure of the silica resulting in an altered ash melting behaviour and viscosity of the silica-rich ashes. Chemical water washing, acid leaching, and blending of rice straw with rice husk strongly influenced the chemical composition of the ashes and improved ash melting behaviour. The analysis also revealed the correlation between the crystalline fraction and the porosity in silica-rich biomass ashes, as well as a crystallinity threshold. These findings are highly relevant for future investigations in boiler designs and production of biogenic silica for material applications.
- ItemLaminin Adsorption and Adhesion of Neurons and Glial Cells on Carbon Implanted Titania Nanotube Scaffolds for Neural Implant Applications(Basel : MDPI, 2022) Frenzel, Jan; Kupferer, Astrid; Zink, Mareike; Mayr, Stefan G.Interfacing neurons persistently to conductive matter constitutes one of the key challenges when designing brain-machine interfaces such as neuroelectrodes or retinal implants. Novel materials approaches that prevent occurrence of loss of long-term adhesion, rejection reactions, and glial scarring are highly desirable. Ion doped titania nanotube scaffolds are a promising material to fulfill all these requirements while revealing sufficient electrical conductivity, and are scrutinized in the present study regarding their neuron–material interface. Adsorption of laminin, an essential extracellular matrix protein of the brain, is comprehensively analyzed. The implantation-dependent decline in laminin adsorption is revealed by employing surface characteristics such as nanotube diameter, (Formula presented.) -potential, and surface free energy. Moreover, the viability of U87-MG glial cells and SH-SY5Y neurons after one and four days are investigated, as well as the material’s cytotoxicity. The higher conductivity related to carbon implantation does not affect the viability of neurons, although it impedes glial cell proliferation. This gives rise to novel titania nanotube based implant materials with long-term stability, and could reduce undesirable glial scarring.
- ItemMicro-embossing of micro-structures in RSA-501 as mold inserts for the replication of micro-lens arrays(Amsterdam : Elsevier, 2022) Kober, Julian; Rolón, Daniel; Hölzel, Florian; Kühne, Stefan; Oberschmidt, Dirk; Arnold, ThomasThe production of mold inserts for the replication of micro-lens arrays through micro-embossing could be an alternative process route compared to diamond turning or milling in order to reduce time and costs. The rapidly solidified aluminum alloy RSA-501 is expected to form micro-structures with low surface roughness because of its ultra-fine grain structure. In micro-embossing challenges like elastic spring back effect, pile-ups, and forming accuracy depend on the material behavior. Therefore, RSA-501 was further characterized and the influence of polishing or flycutting on the material behavior was investigated. To further understand the grain and microstructure samples were sectioned along their cross and longitudinal directions. The grain structure of RSA-501 was oriented along the extrusion direction and the mean grain sizes were <1.00 μm. Furthermore, RSA-501 was micro-embossed to investigate the influence of the material behavior and surface preparation on the forming of micro-structures. The induced surface integrity through flycutting was not deep enough to influence the forming of micro-structures. Therefore, the workpiece surface can be prepared either by polishing or flycutting. When micro-embossing RSA-501, cross and longitudinal sections can be used. However, it is recommended to process the cross section because of its isotropic grain structure. It was shown that the curvature radius of micro-embossed concave structures differs from the tool radius. This is due to the elastic spring back effect. Since the embossed structure remains spherical, the spring back effect can be compensated by adjusting the tool radius.
- ItemStructural Breakdown of Collagen Type I Elastin Blend Polymerization(Basel : MDPI, 2022) Wilharm, Nils; Fischer, Tony; Hayn, Alexander; Mayr, Stefan G.Biopolymer blends are advantageous materials with novel properties that may show performances way beyond their individual constituents. Collagen elastin hybrid gels are a new representative of such materials as they employ elastin’s thermo switching behavior in the physiological temperature regime. Although recent studies highlight the potential applications of such systems, little is known about the interaction of collagen and elastin fibers during polymerization. In fact, the final network structure is predetermined in the early and mostly arbitrary association of the fibers. We investigated type I collagen polymerized with bovine neck ligament elastin with up to 33.3 weight percent elastin and showed, by using a plate reader, zeta potential and laser scanning microscopy (LSM) experiments, that elastin fibers bind in a lateral manner to collagen fibers. Our plate reader experiments revealed an elastin concentration-dependent increase in the polymerization rate, although the rate increase was greatest at intermediate elastin concentrations. As elastin does not significantly change the structural metrics pore size, fiber thickness or 2D anisotropy of the final gel, we are confident to conclude that elastin is incorporated homogeneously into the collagen fibers.
- ItemSecondary electron yield engineering of copper surfaces by 532 nm ultrashort laser pulses(Amsterdam [u.a.] : Elsevier, 2022) Lorenz, Pierre; Bez, Elena; Himmerlich, Marcel; Ehrhardt, Martin; Taborelli, Mauro; Zimmer, KlausNanostructured surfaces exhibit outstanding properties and enable manifold industrial applications. In this study the laser surface processing of polycrystalline, flat copper surfaces by 532 nm picosecond laser irradiation for secondary electron yield (SEY) reduction is reported. The laser beam was scanned in parallel lines across the sample surface in order to modify large surface areas. Morphology and SEY are characterized in dependence of the process parameters to derive correlations and mechanisms of the laser-based SEY engineering process. The nano- and microstructure morphology of the laser-modified surface was characterized by scanning electron microscopy and the secondary electron yield was measured. In general, an SEY reduction with increasing accumulated laser fluence was found. In particular, at low scanning speed (1 mm/s - 10 mm/s) and “high” laser power (~ 1 W) compact nanostructures with a very low SEY maximum of 0.7 are formed.