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- ItemDressed j eff-1/2 objects in mixed-valence lacunar spinel molybdates(London : Nature Publishing Group, 2023) Petersen, Thorben; Prodan, Lilian; Geirhos, Korbinian; Nakamura, Hiroyuki; Kézsmárki, István; Hozoi, LiviuThe lacunar-spinel chalcogenides exhibit magnetic centers in the form of transition-metal tetrahedra. On the basis of density-functional computations, the electronic ground state of an Mo413+ tetrahedron has been postulated as single-configuration a12 e4 t25, where a1, e, and t2 are symmetry-adapted linear combinations of single-site Mo t2g atomic orbitals. Here we unveil the many-body tetramer wave-function: we show that sizable correlations yield a weight of only 62% for the a12 e4 t25 configuration. While spin–orbit coupling within the peculiar valence orbital manifold is still effective, the expectation value of the spin–orbit operator and the g factors deviate from figures describing nominal t5jeff = 1/2 moments. As such, our data documents the dressing of a spin–orbit jeff = 1/2 object with intra-tetramer excitations. Our results on the internal degrees of freedom of these magnetic moments provide a solid theoretical starting point in addressing the intriguing phase transitions observed at low temperatures in these materials.
- ItemRestricted differentiative capacity of Wt1-expressing peritoneal mesothelium in postnatal and adult mice(London : Nature Publishing Group, 2021) Wilm, Thomas P.; Tanton, Helen; Mutter, Fiona; Foisor, Veronica; Middlehurst, Ben; Ward, Kelly; Benameur, Tarek; Hastie, Nicholas; Wilm, BettinaPreviously, genetic lineage tracing based on the mesothelial marker Wt1, appeared to show that peritoneal mesothelial cells have a range of differentiative capacities and are the direct progenitors of vascular smooth muscle in the intestine. However, it was not clear whether this was a temporally limited process or continued throughout postnatal life. Here, using a conditional Wt1-based genetic lineage tracing approach, we demonstrate that the postnatal and adult peritoneum covering intestine, mesentery and body wall only maintained itself and failed to contribute to other visceral tissues. Pulse-chase experiments of up to 6 months revealed that Wt1-expressing cells remained confined to the peritoneum and failed to differentiate into cellular components of blood vessels or other tissues underlying the peritoneum. Our data confirmed that the Wt1-lineage system also labelled submesothelial cells. Ablation of Wt1 in adult mice did not result in changes to the intestinal wall architecture. In the heart, we observed that Wt1-expressing cells maintained the epicardium and contributed to coronary vessels in newborn and adult mice. Our results demonstrate that Wt1-expressing cells in the peritoneum have limited differentiation capacities, and that contribution of Wt1-expressing cells to cardiac vasculature is based on organ-specific mechanisms.
- ItemFuture tree survival in European forests depends on understorey tree diversity(London : Nature Publishing Group, 2022) Billing, Maik; Thonicke, Kirsten; Sakschewski, Boris; Bloh, Werner von; Walz, ArianeClimate change heavily threatens forest ecosystems worldwide and there is urgent need to understand what controls tree survival and forests stability. There is evidence that biodiversity can enhance ecosystem stability (Loreau and de Mazancourt in Ecol Lett 16:106–115, 2013; McCann in Nature 405:228–233, 2000), however it remains largely unclear whether this also holds for climate change and what aspects of biodiversity might be most important. Here we apply machine learning to outputs of a flexible-trait Dynamic Global Vegetation Model to unravel the effects of enhanced functional tree trait diversity and its sub-components on climate-change resistance of temperate forests (http://www.pik-potsdam.de/~billing/video/Forest_Resistance_LPJmLFIT.mp4). We find that functional tree trait diversity enhances forest resistance. We explain this with 1. stronger complementarity effects (~ 25% importance) especially improving the survival of trees in the understorey of up to + 16.8% (± 1.6%) and 2. environmental and competitive filtering of trees better adapted to future climate (40–87% importance). We conclude that forests containing functionally diverse trees better resist and adapt to future conditions. In this context, we especially highlight the role of functionally diverse understorey trees as they provide the fundament for better survival of young trees and filtering of resistant tree individuals in the future.
- ItemSurface acoustic wave nebulization improves compound selectivity of low-temperature plasma ionization for mass spectrometry(London : Nature Publishing Group, 2021) Kiontke, Andreas; Roudini, Mehrzad; Billig, Susan; Fakhfouri, Armaghan; Winkler, Andreas; Birkemeyer, ClaudiaMass spectrometry coupled to low-temperature plasma ionization (LTPI) allows for immediate and easy analysis of compounds from the surface of a sample at ambient conditions. The efficiency of this process, however, strongly depends on the successful desorption of the analyte from the surface to the gas phase. Whilst conventional sample heating can improve analyte desorption, heating is not desirable with respect to the stability of thermally labile analytes. In this study using aromatic amines as model compounds, we demonstrate that (1) surface acoustic wave nebulization (SAWN) can significantly improve compound desorption for LTPI without heating the sample. Furthermore, (2) SAWN-assisted LTPI shows a response enhancement up to a factor of 8 for polar compounds such as aminophenols and phenylenediamines suggesting a paradigm shift in the ionization mechanism. Additional assets of the new technique demonstrated here are (3) a reduced analyte selectivity (the interquartile range of the response decreased by a factor of 7)—a significant benefit in non-targeted analysis of complex samples—and (4) the possibility for automated online monitoring using an autosampler. Finally, (5) the small size of the microfluidic SAWN-chip enables the implementation of the method into miniaturized, mobile LTPI probes.
- ItemAuthor Correction: Surface acoustic wave nebulization improves compound selectivity of low-temperature plasma ionization for mass spectrometry(London : Nature Publishing Group, 2021) Kiontke, Andreas; Roudini, Mehrzad; Billig, Susan; Fakhfouri, Armaghan; Winkler, Andreas; Birkemeyer, ClaudiaCorrection to: Scientific Reports https://doi.org/10.1038/s41598-021-82423-w, published online 03 February 2021
- ItemRapid and low-cost insect detection for analysing species trapped on yellow sticky traps(London : Nature Publishing Group, 2021) Böckmann, Elias; Pfaff, Alexander; Schirrmann, Michael; Pflanz, MichaelWhile insect monitoring is a prerequisite for precise decision-making regarding integrated pest management (IPM), it is time- and cost-intensive. Low-cost, time-saving and easy-to-operate tools for automated monitoring will therefore play a key role in increased acceptance and application of IPM in practice. In this study, we tested the differentiation of two whitefly species and their natural enemies trapped on yellow sticky traps (YSTs) via image processing approaches under practical conditions. Using the bag of visual words (BoVW) algorithm, accurate differentiation between both natural enemies and the Trialeurodes vaporariorum and Bemisia tabaci species was possible, whereas the procedure for B. tabaci could not be used to differentiate this species from T. vaporariorum. The decay of species was considered using fresh and aged catches of all the species on the YSTs, and different pooling scenarios were applied to enhance model performance. The best performance was reached when fresh and aged individuals were used together and the whitefly species were pooled into one category for model training. With an independent dataset consisting of photos from the YSTs that were placed in greenhouses and consequently with a naturally occurring species mixture as the background, a differentiation rate of more than 85% was reached for natural enemies and whiteflies.
- ItemAuthor Correction: A combination of electrochemistry and mass spectrometry to monitor the interaction of reactive species with supported lipid bilayers (Scientific Reports, (2020), 10, 1, (18683), 10.1038/s41598-020-75514-7)(London : Nature Publishing Group, 2021) Ravandeh, M.; Kahlert, H.; Jablonowski, H.; Lackmann, J.-W.; Striesow, J.; Agmo Hernández, V.; Wende, K.Correction to: Scientific Reports https://doi.org/10.1038/s41598-020-75514-7, published online 29 October 2020
- ItemPublisher Correction: Rapid and low-cost insect detection for analysing species trapped on yellow sticky traps(London : Nature Publishing Group, 2021) Böckmann, Elias; Pfaff, Alexander; Schirrmann, Michael; Pflanz, MichaelCorrection to: Scientific Reports https://doi.org/10.1038/s41598-021-89930-w, published online 17 May 2021
- ItemThe SciQA Scientific Question Answering Benchmark for Scholarly Knowledge(London : Nature Publishing Group, 2023) Auer, Sören; Barone, Dante A.C.; Bartz, Cassiano; Cortes, Eduardo G.; Jaradeh, Mohamad Yaser; Karras, Oliver; Koubarakis, Manolis; Mouromtsev, Dmitry; Pliukhin, Dmitrii; Radyush, Daniil; Shilin, Ivan; Stocker, Markus; Tsalapati, EleniKnowledge graphs have gained increasing popularity in the last decade in science and technology. However, knowledge graphs are currently relatively simple to moderate semantic structures that are mainly a collection of factual statements. Question answering (QA) benchmarks and systems were so far mainly geared towards encyclopedic knowledge graphs such as DBpedia and Wikidata. We present SciQA a scientific QA benchmark for scholarly knowledge. The benchmark leverages the Open Research Knowledge Graph (ORKG) which includes almost 170,000 resources describing research contributions of almost 15,000 scholarly articles from 709 research fields. Following a bottom-up methodology, we first manually developed a set of 100 complex questions that can be answered using this knowledge graph. Furthermore, we devised eight question templates with which we automatically generated further 2465 questions, that can also be answered with the ORKG. The questions cover a range of research fields and question types and are translated into corresponding SPARQL queries over the ORKG. Based on two preliminary evaluations, we show that the resulting SciQA benchmark represents a challenging task for next-generation QA systems. This task is part of the open competitions at the 22nd International Semantic Web Conference 2023 as the Scholarly Question Answering over Linked Data (QALD) Challenge.
- ItemTumor cytotoxicity and immunogenicity of a novel V-jet neon plasma source compared to the kINPen(London : Nature Publishing Group, 2021) Miebach, Lea; Freund, Eric; Horn, Stefan; Niessner, Felix; Sagwal, Sanjeev Kumar; von Woedtke, Thomas; Emmert, Steffen; Weltmann, Klaus-Dieter; Clemen, Ramona; Schmidt, Anke; Gerling, Torsten; Bekeschus, SanderRecent research indicated the potential of cold physical plasma in cancer therapy. The plethora of plasma-derived reactive oxygen and nitrogen species (ROS/RNS) mediate diverse antitumor effects after eliciting oxidative stress in cancer cells. We aimed at exploiting this principle using a newly designed dual-jet neon plasma source (Vjet) to treat colorectal cancer cells. A treatment time-dependent ROS/RNS generation induced oxidation, growth retardation, and cell death within 3D tumor spheroids were found. In TUM-CAM, a semi in vivo model, the Vjet markedly reduced vascularized tumors' growth, but an increase of tumor cell immunogenicity or uptake by dendritic cells was not observed. By comparison, the argon-driven single jet kINPen, known to mediate anticancer effects in vitro, in vivo, and in patients, generated less ROS/RNS and terminal cell death in spheroids. In the TUM-CAM model, however, the kINPen was equivalently effective and induced a stronger expression of immunogenic cancer cell death (ICD) markers, leading to increased phagocytosis of kINPen but not Vjet plasma-treated tumor cells by dendritic cells. Moreover, the Vjet was characterized according to the requirements of the DIN-SPEC 91315. Our results highlight the plasma device-specific action on cancer cells for evaluating optimal discharges for plasma cancer treatment.