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- ItemContext-Based Entity Matching for Big Data(Cham : Springer, 2020) Tasnim, Mayesha; Collarana, Diego; Graux, Damien; Vidal, Maria-Esther; Janev, Valentina; Graux, Damien; Jabeen, Hajira; Sallinger, EmanuelIn the Big Data era, where variety is the most dominant dimension, the RDF data model enables the creation and integration of actionable knowledge from heterogeneous data sources. However, the RDF data model allows for describing entities under various contexts, e.g., people can be described from its demographic context, but as well from their professional contexts. Context-aware description poses challenges during entity matching of RDF datasets—the match might not be valid in every context. To perform a contextually relevant entity matching, the specific context under which a data-driven task, e.g., data integration is performed, must be taken into account. However, existing approaches only consider inter-schema and properties mapping of different data sources and prevent users from selecting contexts and conditions during a data integration process. We devise COMET, an entity matching technique that relies on both the knowledge stated in RDF vocabularies and a context-based similarity metric to map contextually equivalent RDF graphs. COMET follows a two-fold approach to solve the problem of entity matching in RDF graphs in a context-aware manner. In the first step, COMET computes the similarity measures across RDF entities and resorts to the Formal Concept Analysis algorithm to map contextually equivalent RDF entities. Finally, COMET combines the results of the first step and executes a 1-1 perfect matching algorithm for matching RDF entities based on the combined scores. We empirically evaluate the performance of COMET on testbed from DBpedia. The experimental results suggest that COMET accurately matches equivalent RDF graphs in a context-dependent manner.
- ItemCase Study: ENVRI Science Demonstrators with D4Science(Cham : Springer, 2020) Candela, Leonardo; Stocker, Markus; Häggström, Ingemar; Enell, Carl-Fredrik; Vitale, Domenico; Papale, Dario; Grenier, Baptiste; Chen, Yin; Obst, Matthias; Zhao, Zhiming; Hellström, MargaretaWhenever a community of practice starts developing an IT solution for its use case(s) it has to face the issue of carefully selecting “the platform” to use. Such a platform should match the requirements and the overall settings resulting from the specific application context (including legacy technologies and solutions to be integrated and reused, costs of adoption and operation, easiness in acquiring skills and competencies). There is no one-size-fits-all solution that is suitable for all application context, and this is particularly true for scientific communities and their cases because of the wide heterogeneity characterising them. However, there is a large consensus that solutions from scratch are inefficient and services that facilitate the development and maintenance of scientific community-specific solutions do exist. This chapter describes how a set of diverse communities of practice efficiently developed their science demonstrators (on analysing and producing user-defined atmosphere data products, greenhouse gases fluxes, particle formation, mosquito diseases) by leveraging the services offered by the D4Science infrastructure. It shows that the D4Science design decisions aiming at streamlining implementations are effective. The chapter discusses the added value injected in the science demonstrators and resulting from the reuse of D4Science services, especially regarding Open Science practices and overall quality of service.
- ItemFederated Query Processing(Cham : Springer, 2020) Endris, Kemele M.; Vidal, Maria-Esther; Graux, Damien; Janev, Valentina; Graux, Damien; Jabeen, Hajira; Sallinger, EmanuelBig data plays a relevant role in promoting both manufacturing and scientific development through industrial digitization and emerging interdisciplinary research. Semantic web technologies have also experienced great progress, and scientific communities and practitioners have contributed to the problem of big data management with ontological models, controlled vocabularies, linked datasets, data models, query languages, as well as tools for transforming big data into knowledge from which decisions can be made. Despite the significant impact of big data and semantic web technologies, we are entering into a new era where domains like genomics are projected to grow very rapidly in the next decade. In this next era, integrating big data demands novel and scalable tools for enabling not only big data ingestion and curation but also efficient large-scale exploration and discovery. Federated query processing techniques provide a solution to scale up to large volumes of data distributed across multiple data sources. Federated query processing techniques resort to source descriptions to identify relevant data sources for a query, as well as to find efficient execution plans that minimize the total execution time of a query and maximize the completeness of the answers. This chapter summarizes the main characteristics of a federated query engine, reviews the current state of the field, and outlines the problems that still remain open and represent grand challenges for the area.
- ItemSurvey on Big Data Applications(Cham : Springer, 2020) Janev, Valentina; Pujić, Dea; Jelić, Marko; Vidal, Maria-Esther; Janev, Valentina; Graux, Damien; Jabeen, Hajira; Sallinger, EmanuelThe goal of this chapter is to shed light on different types of big data applications needed in various industries including healthcare, transportation, energy, banking and insurance, digital media and e-commerce, environment, safety and security, telecommunications, and manufacturing. In response to the problems of analyzing large-scale data, different tools, techniques, and technologies have bee developed and are available for experimentation. In our analysis, we focused on literature (review articles) accessible via the Elsevier ScienceDirect service and the Springer Link service from more recent years, mainly from the last two decades. For the selected industries, this chapter also discusses challenges that can be addressed and overcome using the semantic processing approaches and knowledge reasoning approaches discussed in this book.
- ItemSemantic and Knowledge Engineering Using ENVRI RM(Cham : Springer, 2020) Martin, Paul; Liao, Xiaofeng; Magagna, Barbara; Stocker, Markus; Zhao, Zhiming; Zhao, Zhiming; Hellström, MargaretaThe ENVRI Reference Model provides architects and engineers with the means to describe the architecture and operational behaviour of environmental and Earth science research infrastructures (RIs) in a standardised way using the standard terminology. This terminology and the relationships between specific classes of concept can be used as the basis for the machine-actionable specification of RIs or RI subsystems. Open Information Linking for Environmental RIs (OIL-E) is a framework for capturing architectural and design knowledge about environmental and Earth science RIs intended to help harmonise vocabulary, promote collaboration and identify common standards and technologies across different research infrastructure initiatives. At its heart is an ontology derived from the ENVRI Reference Model. Using this ontology, RI descriptions can be published as linked data, allowing discovery, querying and comparison using established Semantic Web technologies. It can also be used as an upper ontology by which to connect descriptions of RI entities (whether they be datasets, equipment, processes, etc.) that use other, more specific terminologies. The ENVRI Knowledge Base uses OIL-E to capture information about environmental and Earth science RIs in the ENVRI community for query and comparison. The Knowledge Base can be used to identify the technologies and standards used for particular activities and services and as a basis for evaluating research infrastructure subsystems and behaviours against certain criteria, such as compliance with the FAIR data principles.
- ItemTowards Operational Research Infrastructures with FAIR Data and Services(Cham : Springer, 2020) Zhao, Zhiming; Jeffery, Keith; Stocker, Markus; Atkinson, Malcolm; Petzold, Andreas; Zhao, Zhiming; Hellström, MargaretaEnvironmental research infrastructures aim to provide scientists with facilities, resources and services to enable scientists to effectively perform advanced research. When addressing societal challenges such as climate change and pollution, scientists usually need data, models and methods from different domains to tackle the complexity of the complete environmental system. Research infrastructures are thus required to enable all data, including services, products, and virtual research environments is FAIR for research communities: Findable, Accessible, Interoperable and Reusable. In this last chapter, we conclude and identify future challenges in research infrastructure operation, user support, interoperability, and future evolution.
- ItemApplication of hue spectra fingerprinting during cold storage and shelf-life of packaged sweet cherry(Cham : Springer, 2020) Le Nguyen, Lien Phuong; Visy, Anna; Baranyai, László; Friedrich, László; Mahajan, Pramod V.Presented work investigated the application of a new color analysis technique in post-harvest life of sweet cherry (Prunus avium L. ‘Hudson’). The hue spectra fingerprinting creates a histogram of image colors by summarizing the saturation. The advantage of this calculation method is that vivid colors make peaks while neutral background color is eliminated without object segmentation. Partial Least Squares (PLS) regression was used to estimate reference parameters during 9 d cold storage at 10 ± 0.5 °C (RH = 90 ± 1%) and following 2 d shelf-life at 20 ± 0.5 °C. The reference parameters of respiration, weight loss, fruit firmness and total soluble solid (TSS) content were measured. Samples were split into seven groups according to the number of perforations of polypropylene film and fructose concentration of moisture absorber. It was observed that parameters TSS and fruit firmness were the most sensitive to the length of storage. Weight loss was affected significantly by packaging. All reference parameters were estimated by PLS model with R2 > 0.917, but weight loss and respiration obtained high estimation error of RMSE% = 48.02% and 11.76%, respectively. TSS and fruit firmness prediction were successful with RMSE% = 0.84% and 1.85%, respectively. Desiccation and color change of peduncle became visible in the green range of hue spectra. Color change of red fruit was observed with decreasing saturation in the red range of hue spectra. Our findings suggest that hue spectra fingerprinting can be a useful nondestructive method for monitoring quality change of sweet cherry during post-harvest handling and shelf-life. © 2020, The Author(s).