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- ItemUnveiling Relations in the Industry 4.0 Standards Landscape Based on Knowledge Graph Embeddings(Cham : Springer, 2020) Rivas, Ariam; Grangel-González, Irlán; Collarana, Diego; Lehmann, Jens; Vidal, Maria-Esther; Hartmann, Sven; Küng, Josef; Kotsis, Gabriele; Tjoa, A Min; Khalil, IsmailIndustry 4.0 (I4.0) standards and standardization frameworks have been proposed with the goal of empowering interoperability in smart factories. These standards enable the description and interaction of the main components, systems, and processes inside of a smart factory. Due to the growing number of frameworks and standards, there is an increasing need for approaches that automatically analyze the landscape of I4.0 standards. Standardization frameworks classify standards according to their functions into layers and dimensions. However, similar standards can be classified differently across the frameworks, producing, thus, interoperability conflicts among them. Semantic-based approaches that rely on ontologies and knowledge graphs, have been proposed to represent standards, known relations among them, as well as their classification according to existing frameworks. Albeit informative, the structured modeling of the I4.0 landscape only provides the foundations for detecting interoperability issues. Thus, graph-based analytical methods able to exploit knowledge encoded by these approaches, are required to uncover alignments among standards. We study the relatedness among standards and frameworks based on community analysis to discover knowledge that helps to cope with interoperability conflicts between standards. We use knowledge graph embeddings to automatically create these communities exploiting the meaning of the existing relationships. In particular, we focus on the identification of similar standards, i.e., communities of standards, and analyze their properties to detect unknown relations. We empirically evaluate our approach on a knowledge graph of I4.0 standards using the Trans∗ family of embedding models for knowledge graph entities. Our results are promising and suggest that relations among standards can be detected accurately.
- ItemSurvey on Big Data Applications(Cham : Springer, 2020) Janev, Valentina; Pujić, Dea; Jelić, Marko; Vidal, Maria-Esther; Janev, Valentina; Graux, Damien; Jabeen, Hajira; Sallinger, EmanuelThe goal of this chapter is to shed light on different types of big data applications needed in various industries including healthcare, transportation, energy, banking and insurance, digital media and e-commerce, environment, safety and security, telecommunications, and manufacturing. In response to the problems of analyzing large-scale data, different tools, techniques, and technologies have bee developed and are available for experimentation. In our analysis, we focused on literature (review articles) accessible via the Elsevier ScienceDirect service and the Springer Link service from more recent years, mainly from the last two decades. For the selected industries, this chapter also discusses challenges that can be addressed and overcome using the semantic processing approaches and knowledge reasoning approaches discussed in this book.
- ItemA Data-Driven Approach for Analyzing Healthcare Services Extracted from Clinical Records(Piscataway, NJ : IEEE, 2020) Scurti, Manuel; Menasalvas-Ruiz, Ernestina; Vidal, Maria-Esther; Torrente, Maria; Vogiatzis, Dimitrios; Paliouras, George; Provencio, Mariano; Rodríguez-González, Alejandro; Seco de Herrera, Alba García; Rodríguez González, Alejandro; Santosh, K.C.; Temesgen, Zelalem; Soda, PaoloCancer remains one of the major public health challenges worldwide. After cardiovascular diseases, cancer is one of the first causes of death and morbidity in Europe, with more than 4 million new cases and 1.9 million deaths per year. The suboptimal management of cancer patients during treatment and subsequent follows up are major obstacles in achieving better outcomes of the patients and especially regarding cost and quality of life In this paper, we present an initial data-driven approach to analyze the resources and services that are used more frequently by lung-cancer patients with the aim of identifying where the care process can be improved by paying a special attention on services before diagnosis to being able to identify possible lung-cancer patients before they are diagnosed and by reducing the length of stay in the hospital. Our approach has been built by analyzing the clinical notes of those oncological patients to extract this information and their relationships with other variables of the patient. Although the approach shown in this manuscript is very preliminary, it shows that quite interesting outcomes can be derived from further analysis. © 2020 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.
- ItemInteraction Network Analysis Using Semantic Similarity Based on Translation Embeddings(Berlin ; Heidelberg : Springer, 2019) Manzoor Bajwa, Awais; Collarana, Diego; Vidal, Maria-Esther; Acosta, Maribel; Cudré-Mauroux, Philippe; Maleshkova, Maria; Pellegrini, Tassilo; Sack, Harald; Sure-Vetter, YorkBiomedical knowledge graphs such as STITCH, SIDER, and Drugbank provide the basis for the discovery of associations between biomedical entities, e.g., interactions between drugs and targets. Link prediction is a paramount task and represents a building block for supporting knowledge discovery. Although several approaches have been proposed for effectively predicting links, the role of semantics has not been studied in depth. In this work, we tackle the problem of discovering interactions between drugs and targets, and propose SimTransE, a machine learning-based approach that solves this problem effectively. SimTransE relies on translating embeddings to model drug-target interactions and values of similarity across them. Grounded on the vectorial representation of drug-target interactions, SimTransE is able to discover novel drug-target interactions. We empirically study SimTransE using state-of-the-art benchmarks and approaches. Experimental results suggest that SimTransE is competitive with the state of the art, representing, thus, an effective alternative for knowledge discovery in the biomedical domain.
- ItemCausal Relationship over Knowledge Graphs(2022) Huang, Hao; Al Hasan, Mohammad; Xiong, LiCausality has been discussed for centuries, and the theory of causal inference over tabular data has been broadly studied and utilized in multiple disciplines. However, only a few works attempt to infer the causality while exploiting the meaning of the data represented in a data structure like knowledge graph. These works offer a glance at the possibilities of causal inference over knowledge graphs, but do not yet consider the metadata, e.g., cardinalities, class subsumption and overlap, and integrity constraints. We propose CareKG, a new formalism to express causal relationships among concepts, i.e., classes and relations, and enable causal queries over knowledge graphs using semantics of metadata. We empirically evaluate the expressiveness of CareKG in a synthetic knowledge graph concerning cardinalities, class subsumption and overlap, integrity constraints. Our initial results indicate that CareKG can represent and measure causal relations with some semantics which are uncovered by state-of-the-art approaches.
- ItemEasy Semantification of Bioassays(Heidelberg : Springer, 2022) Anteghini, Marco; D’Souza, Jennifer; dos Santos, Vitor A. P. Martins; Auer, SörenBiological data and knowledge bases increasingly rely on Semantic Web technologies and the use of knowledge graphs for data integration, retrieval and federated queries. We propose a solution for automatically semantifying biological assays. Our solution contrasts the problem of automated semantification as labeling versus clustering where the two methods are on opposite ends of the method complexity spectrum. Characteristically modeling our problem, we find the clustering solution significantly outperforms a deep neural network state-of-the-art labeling approach. This novel contribution is based on two factors: 1) a learning objective closely modeled after the data outperforms an alternative approach with sophisticated semantic modeling; 2) automatically semantifying biological assays achieves a high performance F1 of nearly 83%, which to our knowledge is the first reported standardized evaluation of the task offering a strong benchmark model.
- ItemFormalizing Gremlin pattern matching traversals in an integrated graph Algebra(Aachen, Germany : RWTH Aachen, 2019) Thakkar, Harsh; Auer, Sören; Vidal, Maria-Esther; Samavi, Reza; Consens, Mariano P.; Khatchadourian, Shahan; Nguyen, Vinh; Sheth, Amit; Giménez-García, José M.; Thakkar, HarshGraph data management (also called NoSQL) has revealed beneficial characteristics in terms of flexibility and scalability by differ-ently balancing between query expressivity and schema flexibility. This peculiar advantage has resulted into an unforeseen race of developing new task-specific graph systems, query languages and data models, such as property graphs, key-value, wide column, resource description framework (RDF), etc. Present-day graph query languages are focused towards flex-ible graph pattern matching (aka sub-graph matching), whereas graph computing frameworks aim towards providing fast parallel (distributed) execution of instructions. The consequence of this rapid growth in the variety of graph-based data management systems has resulted in a lack of standardization. Gremlin, a graph traversal language, and machine provide a common platform for supporting any graph computing sys-tem (such as an OLTP graph database or OLAP graph processors). In this extended report, we present a formalization of graph pattern match-ing for Gremlin queries. We also study, discuss and consolidate various existing graph algebra operators into an integrated graph algebra.
- ItemSHACL Constraint Validation during SPARQL Query Processing(Aachen, Germany : RWTH Aachen, 2021) Rohde, Phlipp D.The importance of knowledge graphs is increasing. Due to their application in more and more real-world use-cases the data quality issue has to be addressed. The Shapes Constraint Language (SHACL) is the W3C recommendation language for defining integrity constraints over knowledge graphs expressed in the Resource Description Framework (RDF). Annotating SPARQL query results with metadata from the SHACL validation provides a better understanding of the knowledge graph and its data quality. We propose a query engine that is able to efficiently evaluate which instances in the knowledge graph fulfill the requirements from the SHACL shape schema and annotate the SPARQL query result with this metadata. Hence, adding the dimension of explainability to SPARQL query processing. Our preliminary analysis shows that the proposed optimizations performed for SHACL validation during SPARQL query processing increase the performance compared to a naive approach. However, in some queries the naive approach outperforms the optimizations. This shows that more work needs to be done in this topic to fully comprehend all impacting factors and to identify the amount of overhead added to the query execution.
- ItemOn the Role of Images for Analyzing Claims in Social Media(Aachen, Germany : RWTH Aachen, 2021) Cheema, Gullal S.; Hakimov, Sherzod; Müller-Budack, Eric; Ewerth, RalphFake news is a severe problem in social media. In this paper, we present an empirical study on visual, textual, and multimodal models for the tasks of claim, claim check-worthiness, and conspiracy detection, all of which are related to fake news detection. Recent work suggests that images are more influential than text and often appear alongside fake text. To this end, several multimodal models have been proposed in recent years that use images along with text to detect fake news on social media sites like Twitter. However, the role of images is not well understood for claim detection, specifically using transformer-based textual and multimodal models. We investigate state-of-the-art models for images, text (Transformer-based), and multimodal information for four different datasets across two languages to understand the role of images in the task of claim and conspiracy detection.
- ItemMeetings and Mood-Related or Not? Insights from Student Software Projects(New York : Association for Computing Machinery, 2022) Klünder, Jil; Karras, Oliver; Madeiral, Fernanda; Lassenius, Casper[Background:] Teamwork, coordination, and communication are a prerequisite for the timely completion of a software project. Meetings as a facilitator for coordination and communication are an established medium for information exchange. Analyses of meetings in software projects have shown that certain interactions in these meetings, such as proactive statements followed by supportive ones, influence the mood and motivation of a team, which in turn affects its productivity. So far, however, research has focused only on certain interactions at a detailed level, requiring a complex and fine-grained analysis of a meeting itself. [Aim:] In this paper, we investigate meetings from a more abstract perspective, focusing on the polarity of the statements, i.e., whether they appear to be positive, negative, or neutral. [Method:] We analyze the relationship between the polarity of statements in meetings and different social aspects, including conflicts as well as the mood before and after a meeting. [Results:] Our results emerge from 21 student software project meetings and show some interesting insights: (1) Positive mood before a meeting is both related to the amount of positive statements in the beginning, as well as throughout the whole meeting, (2) negative mood before the meeting only influences the amount of negative statements in the first quarter of the meeting, but not the whole meeting, and (3) the amount of positive and negative statements during the meeting has no influence on the mood afterwards. [Conclusions:] We conclude that the behaviour in meetings might rather influence short-term emotional states (feelings) than long-term emotional states (mood), which are more important for the project.