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- ItemStructure-property relationship of Co 2 MnSi thin films in response to He + -irradiation([London] : Macmillan Publishers Limited, part of Springer Nature, 2019) Hammerath, Franziska; Bali, Rantej; Hübner, René; Brandt, Mira R. D.; Rodan, Steven; Potzger, Kay; Böttger, Roman; Sakuraba, Yuya; Wurmehl, SabineWe investigated the structure-property relationship of Co2MnSi Heusler thin films upon the irradiation with He+ ions. The variation of the crystal structure with increasing ion fluence has been probed using nuclear magnetic resonance (NMR) and transmission electron microscopy (TEM), and associated with the corresponding changes of the magnetic behavior. A decrease of both the structural order and the moment in saturation is observed. Specifically, we detect a direct transition from a highly L21-ordered to a fully A2-disordered structure type and quantify the evolution of the A2 structural contribution as a function of ion fluence. Complementary TEM analysis reveals a spatially-resolved distribution of the L21 and A2 phases showing that the A2 disorder starts at the upper part of the films. The structural degradation in turn leads to a decreasing magnetic moment in saturation in response to the increasing fluence.
- ItemCombining super-resolution microcopy with neuronal network recording using magnesium fluoride thin films as cover layer for multi-electrode array technology(Berlin : Nature Publishing, 2019) Schmidl, Lars; Schmidl, Gabriele; Gawlik, Annett; Dellith, Jan; Hübner, Uwe; Tympel, Volker; Schmidl, Frank; Plentz, Jonathan; Geis, Christian; Haselmann, HolgerWe present an approach for fabrication of reproducible, chemically and mechanically robust functionalized layers based on MgF2 thin films on thin glass substrates. These show great advantages for use in super-resolution microscopy as well as for multi-electrode-array fabrication and are especially suited for combination of these techniques. The transparency of the coated substrates with the low refractive index material is adjustable by the layer thickness and can be increased above 92%. Due to the hydrophobic and lipophilic properties of the thin crystalline MgF2 layers, the temporal stable adhesion needed for fixation of thin tissue, e.g. cryogenic brain slices is given. This has been tested using localization-based super-resolution microscopy with currently highest spatial resolution in light microscopy. We demonstrated that direct stochastic optical reconstruction microscopy revealed in reliable imaging of structures of central synapses by use of double immunostaining of post- (homer1 and GluA2) and presynaptic (bassoon) marker structure in a 10 µm brain slice without additional fixing of the slices. Due to the proven additional electrical insulating effect of MgF2 layers, surfaces of multi-electrode-arrays were coated with this material and tested by voltage-current-measurements. MgF2 coated multi-electrode-arrays can be used as a functionalized microscope cover slip for combination with live-cell super-resolution microscopy.
- ItemPhysical plasma-treated saline promotes an immunogenic phenotype in CT26 colon cancer cells in vitro and in vivo([London] : Macmillan Publishers Limited, part of Springer Nature, 2019) Freund, Eric; Liedtke, Kim Rouven; van der Linde, Julia; Metelmann, Hans-Robert; Heidecke, Claus-Dieter; Partecke, Lars-Ivo; Bekeschus, SanderMetastatic colorectal cancer is the fourth most common cause of cancer death. Current options in palliation such as hyperthermic intraperitoneal chemotherapy (HIPEC) present severe side effects. Recent research efforts suggested the therapeutic use of oxidant-enriched liquid using cold physical plasma. To investigate a clinically accepted treatment regimen, we assessed the antitumor capacity of plasma-treated saline solution. In response to such liquid, CT26 murine colon cancer cells were readily oxidized and showed cell growth with subsequent apoptosis, cell cycle arrest, and upregulation of immunogenic cell death (ICD) markers in vitro. This was accompanied by marked morphological changes with re-arrangement of actin fibers and reduced motility. Induction of an epithelial-to-mesenchymal transition phenotype was not observed. Key results were confirmed in MC38 colon and PDA6606 pancreatic cancer cells. Compared to plasma-treated saline, hydrogen peroxide was inferiorly toxic in 3D tumor spheroids but of similar efficacy in 2D models. In vivo, plasma-treated saline decreased tumor burden in Balb/C mice. This was concomitant with elevated numbers of intratumoral macrophages and increased T cell activation following incubation with CT26 cells ex vivo. Being a potential adjuvant for HIPEC therapy, our results suggest oxidizing saline solutions to inactivate colon cancer cells while potentially stimulating antitumor immune responses.
- ItemStatistical Properties and Predictability of Extreme Epileptic Events([London] : Macmillan Publishers Limited, part of Springer Nature, 2019) Frolov, Nikita S.; Grubov, Vadim V.; Maksimenko, Vladimir A.; Lüttjohann, Annika; Makarov, Vladimir V.; Pavlov, Alexey N.; Sitnikova, Evgenia; Pisarchik, Alexander N.; Kurths, Jürgen; Hramov, Alexander E.The use of extreme events theory for the analysis of spontaneous epileptic brain activity is a relevant multidisciplinary problem. It allows deeper understanding of pathological brain functioning and unraveling mechanisms underlying the epileptic seizure emergence along with its predictability. The latter is a desired goal in epileptology which might open the way for new therapies to control and prevent epileptic attacks. With this goal in mind, we applied the extreme event theory for studying statistical properties of electroencephalographic (EEG) recordings of WAG/Rij rats with genetic predisposition to absence epilepsy. Our approach allowed us to reveal extreme events inherent in this pathological spiking activity, highly pronounced in a particular frequency range. The return interval analysis showed that the epileptic seizures exhibit a highly-structural behavior during the active phase of the spiking activity. Obtained results evidenced a possibility for early (up to 7 s) prediction of epileptic seizures based on consideration of EEG statistical properties.
- ItemTracing microplastics in aquatic environments based on sediment analogies([London] : Macmillan Publishers Limited, part of Springer Nature, 2019) Enders, Kristina; Käppler, Andrea; Biniasch, Oliver; Feldens, Peter; Stollberg, Nicole; Lange, Xaver; Fischer, Dieter; Eichhorn, Klaus-Jochen; Pollehne, Falk; Oberbeckmann, Sonja; Labrenz, MatthiasMicroplastics (MP) data collection from the aquatic environment is a challenging endeavour that sets apparent limitations to regional and global MP quantification. Expensive data collection causes small sample sizes and oftentimes existing data sets are compared without accounting for natural variability due to hydrodynamic processes governing the distribution of particles. In Warnow estuarine sediments (Germany) we found significant correlations between high-density polymer size fractions (≥500 µm) and sediment grain size. Among potential predictor variables (source and environmental terms) sediment grain size was the critical proxy for MP abundance. The MP sediment relationship can be explained by the force necessary to start particle transport: at the same level of fluid motion, transported sediment grains and MP particles are offset in size by one to two orders of magnitude. Determining grain-size corrected MP abundances by fractionated granulometric normalisation is recommended as a basis for future MP projections and identification of sinks and sources.
- ItemAdvanced numerical investigation of the heat flux in an array of microbolometers([London] : Macmillan Publishers Limited, part of Springer Nature, 2019) Stocchi, Matteo; Mencarelli, Davide; Pierantoni, Luca; Göritz, Alexander; Kaynak, Canan Baristiran; Wietstruck, Matthias; Kaynak, MehmetThe investigation of the thermal properties of an array of microbolometers has been carried out by mean of two independent numerical analysis, respectively the Direct-Simulation Monte Carlo (DSMC) and the classic diffusive approach of the Fourier's equation. In particular, the thermal dissipation of a hot membrane placed in a low-pressure cavity has been studied for different values of the temperature of the hot body and for different values of the pressure of the environment. The results for the heat flux derived from the two approaches have then been compared and discussed.
- ItemRole of hole confinement in the recombination properties of InGaN quantum structures([London] : Macmillan Publishers Limited, part of Springer Nature, 2019) Anikeeva, M.; Albrecht, M.; Mahler, F.; Tomm, J. W.; Lymperakis, L.; Chèze, C.; Calarco, R.; Neugebauer, J.; Schulz, T.We study the isolated contribution of hole localization for well-known charge carrier recombination properties observed in conventional, polar InGaN quantum wells (QWs). This involves the interplay of charge carrier localization and non-radiative transitions, a non-exponential decay of the emission and a specific temperature dependence of the emission, denoted as “s-shape”. We investigate two dimensional In0.25Ga0.75N QWs of single monolayer (ML) thickness, stacked in a superlattice with GaN barriers of 6, 12, 25 and 50 MLs. Our results are based on scanning and high-resolution transmission electron microscopy (STEM and HR-TEM), continuous-wave (CW) and time-resolved photoluminescence (TRPL) measurements as well as density functional theory (DFT) calculations. We show that the recombination processes in our structures are not affected by polarization fields and electron localization. Nevertheless, we observe all the aforementioned recombination properties typically found in standard polar InGaN quantum wells. Via decreasing the GaN barrier width to 6 MLs and below, the localization of holes in our QWs is strongly reduced. This enhances the influence of non-radiative recombination, resulting in a decreased lifetime of the emission, a weaker spectral dependence of the decay time and a reduced s-shape of the emission peak. These findings suggest that single exponential decay observed in non-polar QWs might be related to an increasing influence of non-radiative transitions.
- ItemNetwork-based identification and characterization of teleconnections on different scales([London] : Macmillan Publishers Limited, part of Springer Nature, 2019) Agarwal, Ankit; Caesar, Levke; Marwan, Norbert; Maheswaran, Rathinasamy; Merz, Bruno; Kurths, JürgenSea surface temperature (SST) patterns can – as surface climate forcing – affect weather and climate at large distances. One example is El Niño-Southern Oscillation (ENSO) that causes climate anomalies around the globe via teleconnections. Although several studies identified and characterized these teleconnections, our understanding of climate processes remains incomplete, since interactions and feedbacks are typically exhibited at unique or multiple temporal and spatial scales. This study characterizes the interactions between the cells of a global SST data set at different temporal and spatial scales using climate networks. These networks are constructed using wavelet multi-scale correlation that investigate the correlation between the SST time series at a range of scales allowing instantaneously deeper insights into the correlation patterns compared to traditional methods like empirical orthogonal functions or classical correlation analysis. This allows us to identify and visualise regions of – at a certain timescale – similarly evolving SSTs and distinguish them from those with long-range teleconnections to other ocean regions. Our findings re-confirm accepted knowledge about known highly linked SST patterns like ENSO and the Pacific Decadal Oscillation, but also suggest new insights into the characteristics and origins of long-range teleconnections like the connection between ENSO and Indian Ocean Dipole.
- ItemStructural insights into heme binding to IL-36α proinflammatory cytokine(Berlin : Nature Publishing, 2019) Wißbrock, Amelie; Goradia, Nishit; Kumar, Amit; Paul George, Ajay Abisheck; Kühl, Toni; Bellstedt, Peter; Ramachandran, Ramadurai; Hoffmann, Patrick; Galler, Kerstin; Popp, Jürgen; Neugebauer, Ute; Hampel, Kornelia; Zimmermann, Bastian; Adam, Susanne; Wiendl, Maximilian; Krönke, Gerhard; Hamza, Iqbal; Heinemann, Stefan H.; Frey, Silke; Hueber, Axel J.; Ohlenschläger, Oliver; Imhof, DianaCytokines of the interleukin (IL)-1 family regulate immune and inflammatory responses. The recently discovered IL-36 family members are involved in psoriasis, rheumatoid arthritis, and pulmonary diseases. Here, we show that IL-36α interacts with heme thereby contributing to its regulation. Based on in-depth spectroscopic analyses, we describe two heme-binding sites in IL-36α that associate with heme in a pentacoordinated fashion. Solution NMR analysis reveals structural features of IL-36α and its complex with heme. Structural investigation of a truncated IL-36α supports the notion that the N-terminus is necessary for association with its cognate receptor. Consistent with our structural studies, IL-36-mediated signal transduction was negatively regulated by heme in synovial fibroblast-like synoviocytes from rheumatoid arthritis patients. Taken together, our results provide a structural framework for heme-binding proteins and add IL-1 cytokines to the group of potentially heme-regulated proteins.
- ItemConstraining modelled global vegetation dynamics and carbon turnover using multiple satellite observations([London] : Macmillan Publishers Limited, part of Springer Nature, 2019) Forkel, Matthias; Drüke, Markus; Thurner, Martin; Dorigo, Wouter; Schaphoff, Sibyll; Thonicke, Kirsten; von Bloh, Werner; Carvalhais, NunoThe response of land ecosystems to future climate change is among the largest unknowns in the global climate-carbon cycle feedback. This uncertainty originates from how dynamic global vegetation models (DGVMs) simulate climate impacts on changes in vegetation distribution, productivity, biomass allocation, and carbon turnover. The present-day availability of a multitude of satellite observations can potentially help to constrain DGVM simulations within model-data integration frameworks. Here, we use satellite-derived datasets of the fraction of absorbed photosynthetic active radiation (FAPAR), sun-induced fluorescence (SIF), above-ground biomass of trees (AGB), land cover, and burned area to constrain parameters for phenology, productivity, and vegetation dynamics in the LPJmL4 DGVM. Both the prior and the optimized model accurately reproduce present-day estimates of the land carbon cycle and of temporal dynamics in FAPAR, SIF and gross primary production. However, the optimized model reproduces better the observed spatial patterns of biomass, tree cover, and regional forest carbon turnover. Using a machine learning approach, we found that remaining errors in simulated forest carbon turnover can be explained with bioclimatic variables. This demonstrates the need to improve model formulations for climate effects on vegetation turnover and mortality despite the apparent successful constraint of simulated vegetation dynamics with multiple satellite observations.