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A generic pixel-to-point comparison for simulated large-scale ecosystem properties and ground-based observations: An example from the Amazon region

2018, Rammig, Anja, Heinke, Jens, Hofhansl, Florian, Verbeeck, Hans, Baker, Timothy R., Christoffersen, Bradley, Ciais, Philippe, De Deurwaerder, Hannes, Fleischer, Katrin, Galbraith, David, Guimberteau, Matthieu, Huth, Andreas, Johnson, Michelle, Krujit, Bart, Langerwisch, Fanny, Meir, Patrick, Papastefanou, Phillip, Sampaio, Gilvan, Thonicke, Kirsten, von Randow, Celso, Zang, Christian, Rödig, Edna

Comparing model output and observed data is an important step for assessing model performance and quality of simulation results. However, such comparisons are often hampered by differences in spatial scales between local point observations and large-scale simulations of grid cells or pixels. In this study, we propose a generic approach for a pixel-to-point comparison and provide statistical measures accounting for the uncertainty resulting from landscape variability and measurement errors in ecosystem variables. The basic concept of our approach is to determine the statistical properties of small-scale (within-pixel) variability and observational errors, and to use this information to correct for their effect when large-scale area averages (pixel) are compared to small-scale point estimates. We demonstrate our approach by comparing simulated values of aboveground biomass, woody productivity (woody net primary productivity, NPP) and residence time of woody biomass from four dynamic global vegetation models (DGVMs) with measured inventory data from permanent plots in the Amazon rainforest, a region with the typical problem of low data availability, potential scale mismatch and thus high model uncertainty. We find that the DGVMs under- and overestimate aboveground biomass by 25% and up to 60%, respectively. Our comparison metrics provide a quantitative measure for model-data agreement and show moderate to good agreement with the region-wide spatial biomass pattern detected by plot observations. However, all four DGVMs overestimate woody productivity and underestimate residence time of woody biomass even when accounting for the large uncertainty range of the observational data. This is because DGVMs do not represent the relation between productivity and residence time of woody biomass correctly. Thus, the DGVMs may simulate the correct large-scale patterns of biomass but for the wrong reasons. We conclude that more information about the underlying processes driving biomass distribution are necessary to improve DGVMs. Our approach provides robust statistical measures for any pixel-to-point comparison, which is applicable for evaluation of models and remote-sensing products.

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Localized crystallization in shear bands of a metallic glass

2016, Yan, Zhijie, Song, Kaikai, Hu, Yong, Dai, Fuping, Chu, Zhibing, Eckert, Jürgen

Stress-induced viscous flow is the characteristic of atomic movements during plastic deformation of metallic glasses in the absence of substantial temperature increase, which suggests that stress state plays an important role in mechanically induced crystallization in a metallic glass. However, it is poorly understood. Here, we report on the stress-induced localized crystallization in individual shear bands of Zr60Al15Ni25 metallic glass subjected to cold rolling. We find that crystallization in individual shear bands preferentially occurs in the regions neighboring the amorphous matrix, where the materials are subjected to compressive stresses demonstrated by our finite element simulations. Our results provide direct evidence that the mechanically induced crystallization kinetics is closely related with the stress state. The crystallization kinetics under compressive and tensile stresses are interpreted within the frameworks of potential energy landscape and classical nucleation theory, which reduces the role of stress state in mechanically induced crystallization in a metallic glass.

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Proximal Soil Sensing - A Contribution for Species Habitat Distribution Modelling of Earthworms in Agricultural Soils?

2016, Schirrmann, Michael, Joschko, Monika, Gebbers, Robin, Kramer, Eckart, Zörner, Mirjam, Barkusky, Dietmar, Timmer, Jens

Background: Earthworms are important for maintaining soil ecosystem functioning and serve as indicators of soil fertility. However, detection of earthworms is time-consuming, which hinders the assessment of earthworm abundances with high sampling density over entire fields. Recent developments of mobile terrestrial sensor platforms for proximal soil sensing (PSS) provided new tools for collecting dense spatial information of soils using various sensing principles. Yet, the potential of PSS for assessing earthworm habitats is largely unexplored. This study investigates whether PSS data contribute to the spatial prediction of earthworm abundances in species distribution models of agricultural soils. Methodology/Principal Findings: Proximal soil sensing data, e.g., soil electrical conductivity (EC), pH, and near infrared absorbance (NIR), were collected in real-time in a field with two management strategies (reduced tillage / conventional tillage) and sandy to loam soils. PSS was related to observations from a long-term (11 years) earthworm observation study conducted at 42 plots. Earthworms were sampled from 0.5 x 0.5 x 0.2 m³ soil blocks and identified to species level. Sensor data were highly correlated with earthworm abundances observed in reduced tillage but less correlated with earthworm abundances observed in conventional tillage. This may indicate that management influences the sensor-earthworm relationship. Generalized additive models and state-space models showed that modelling based on data fusion from EC, pH, and NIR sensors produced better results than modelling without sensor data or data from just a single sensor. Regarding the individual earthworm species, particular sensor combinations were more appropriate than others due to the different habitat requirements of the earthworms. Earthworm species with soil-specific habitat preferences were spatially predicted with higher accuracy by PSS than more ubiquitous species. Conclusions/Significance: Our findings suggest that PSS contributes to the spatial modelling of earthworm abundances at field scale and that it will support species distribution modelling in the attempt to understand the soil-earthworm relationships in agroecosystems.

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Research data management in agricultural sciences in Germany: We are not yet where we want to be

2022, Senft, Matthias, Stahl, Ulrike, Svoboda, Nikolai

To meet the future challenges and foster integrated and holistic research approaches in agricultural sciences, new and sustainable methods in research data management (RDM) are needed. The involvement of scientific users is a critical success factor for their development. We conducted an online survey in 2020 among different user groups in agricultural sciences about their RDM practices and needs. In total, the questionnaire contained 52 questions on information about produced and (re-)used data, data quality aspects, information about the use of standards, publication practices and legal aspects of agricultural research data, the current situation in RDM in regards to awareness, consulting and curricula as well as needs of the agricultural community in respect to future developments. We received 196 (partially) completed questionnaires from data providers, data users, infrastructure and information service providers. In addition to the diversity in the research data landscape of agricultural sciences in Germany, the study reveals challenges, deficits and uncertainties in handling research data in agricultural sciences standing in the way of access and efficient reuse of valuable research data. However, the study also suggests and discusses potential solutions to enhance data publications, facilitate and secure data re-use, ensure data quality and develop services (i.e. training, support and bundling services). Therefore, our research article provides the basis for the development of common RDM, future infrastructures and services needed to foster the cultural change in handling research data across agricultural sciences in Germany and beyond.