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Proximal Soil Sensing - A Contribution for Species Habitat Distribution Modelling of Earthworms in Agricultural Soils?

2016, Schirrmann, Michael, Joschko, Monika, Gebbers, Robin, Kramer, Eckart, Zörner, Mirjam, Barkusky, Dietmar, Timmer, Jens

Background: Earthworms are important for maintaining soil ecosystem functioning and serve as indicators of soil fertility. However, detection of earthworms is time-consuming, which hinders the assessment of earthworm abundances with high sampling density over entire fields. Recent developments of mobile terrestrial sensor platforms for proximal soil sensing (PSS) provided new tools for collecting dense spatial information of soils using various sensing principles. Yet, the potential of PSS for assessing earthworm habitats is largely unexplored. This study investigates whether PSS data contribute to the spatial prediction of earthworm abundances in species distribution models of agricultural soils. Methodology/Principal Findings: Proximal soil sensing data, e.g., soil electrical conductivity (EC), pH, and near infrared absorbance (NIR), were collected in real-time in a field with two management strategies (reduced tillage / conventional tillage) and sandy to loam soils. PSS was related to observations from a long-term (11 years) earthworm observation study conducted at 42 plots. Earthworms were sampled from 0.5 x 0.5 x 0.2 m³ soil blocks and identified to species level. Sensor data were highly correlated with earthworm abundances observed in reduced tillage but less correlated with earthworm abundances observed in conventional tillage. This may indicate that management influences the sensor-earthworm relationship. Generalized additive models and state-space models showed that modelling based on data fusion from EC, pH, and NIR sensors produced better results than modelling without sensor data or data from just a single sensor. Regarding the individual earthworm species, particular sensor combinations were more appropriate than others due to the different habitat requirements of the earthworms. Earthworm species with soil-specific habitat preferences were spatially predicted with higher accuracy by PSS than more ubiquitous species. Conclusions/Significance: Our findings suggest that PSS contributes to the spatial modelling of earthworm abundances at field scale and that it will support species distribution modelling in the attempt to understand the soil-earthworm relationships in agroecosystems.

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Biogas residue parameterization for soil organic matter modeling

2018-10-12, Prays, Nadia, Dominik, Peter, Sänger, Anja, Franko, Uwe

A variety of biogas residues (BGRs) have been used as organic fertilizer in agriculture. The use of these residues affects the storage of soil organic matter (SOM). In most cases, SOM changes can only be determined in long-term observations. Therefore, predictive modeling can be an efficient alternative, provided that the parameters required by the model are known for the considered BGRs. This study was conducted as a first approach to estimating the organic matter (OM) turnover parameters of BGRs for process modeling. We used carbon mineralization data from six BGRs from an incubation experiment, representing a range of substrate inputs, to calculate a turnover coefficient k controlling the velocity of fresh organic matter (FOM) decay and a synthesis coefficient describing the SOM creation from FOM. An SOM turnover model was applied in inverse mode to identify both parameters. In a second step, we related the parameters k and to chemical properties of the corresponding BGRs using a linear regression model and applied them to a long-term scenario simulation. According to the results of the incubation experiment, the k values ranged between 0.28 and 0.58 d-1 depending on the chemical composition of the FOM. The estimated values ranged between 0.8 and 0.89. The best linear relationship of k was found to occur with pH (R2 = 0.863). Parameter is related to the Ct/Norg ratio (R2 = 0.696). Long-term scenario simulations emphasized the necessity of specific k and values related to the chemical properties for each BGR. However, further research is needed to validate and improve these preliminary results. © 2018 Prays et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

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Representativeness of European biochar research: part I–field experiments

2017, Verheijen, Frank G. A., Mankasingh, Utra, Penizek, Vit, Panzacchi, Pietro, Glaser, Bruno, Jeffery, Simon, Bastos, Ana Catarina, Tammeorg, Priit, Kern, Jürgen, Zavalloni, Costanza, Zanchettin, Giulia, Sakrabani, Ruben

A representativeness survey of existing European Biochar field experiments within the Biochar COST Action TD1107 was conducted to gather key information for setting up future experiments and collaborations, and to minimise duplication of efforts amongst European researchers. Woody feedstock biochar, applied without organic or inorganic fertiliser appears over-represented compared to other categories, especially considering the availability of crop residues, manures, and other organic waste streams and the efforts towards achieving a zero waste economy. Fertile arable soils were also over-represented while shallow unfertile soils were under-represented. Many of the latter are likely in agroforestry or forest plantation land use. The most studied theme was crop production. However, other themes that can provide evidence of mechanisms, as well as potential undesired side-effects, were relatively well represented. Biochar use for soil contamination remediation was the least represented theme; further work is needed to identify which specific contaminants, or mixtures of contaminants, have the potential for remediation by different biochars. © 2017 The Author(s) Published by VGTU Press and Informa UK Limited, [trading as Taylor & Francis Group].

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Microbial respiration and natural attenuation of benzene contaminated soils investigated by cavity enhanced Raman multi-gas spectroscopy

2015, Jochum, Tobias, Michalzik, Beate, Bachmann, Anne, Popp, Jürgen, Frosch, Torsten

Soil and groundwater contamination with benzene can cause serious environmental damage. However, many soil microorganisms are capable to adapt and are known to strongly control the fate of organic contamination. Innovative cavity enhanced Raman multi-gas spectroscopy (CERS) was applied to investigate the short-term response of the soil micro-flora to sudden surface contamination with benzene regarding the temporal variations of gas products and their exchange rates with the adjacent atmosphere. 13C-labeled benzene was spiked on a silty-loamy soil column in order to track and separate the changes in heterotrophic soil respiration – involving 12CO2 and O2 – from the natural attenuation process of benzene degradation to ultimately form 13CO2. The respiratory quotient (RQ) decreased from a value 0.98 to 0.46 directly after the spiking and increased again within 33 hours to a value of 0.72. This coincided with the maximum 13CO2 concentration rate (0.63 μmol m−2 s−1), indicating the highest benzene degradation at 33 hours after the spiking event. The diffusion of benzene in the headspace and the biodegradation into 13CO2 were simultaneously monitored and 12 days after the benzene spiking no measurable degradation was detected anymore. The RQ finally returned to a value of 0.96 demonstrating the reestablished aerobic respiration.

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Representativeness of European biochar research: part II–pot and laboratory studies

2017, Sakrabani, Ruben, Kern, Jürgen, Mankasingh, Utra, Zavalloni, Costanza, Zanchettin, Giulia, Bastos, Ana Catarina, Tammeorg, Priit, Jeffery, Simon, Glaser, Bruno, Verheijen, Frank G. A.

Biochar research is extensive and there are many pot and laboratory studies carried out in Europe to investigate the mechanistic understanding that govern its impact on soil processes. A survey was conducted in order to find out how representative these studies under controlled experimental conditions are of actual environmental conditions in Europe and biomass availability and conversion technologies. The survey consisted of various key questions related to types of soil and biochar used, experimental conditions and effects of biochar additions on soil chemical, biological and physical properties. This representativeness study showed that soil texture and soil organic carbon contents used by researchers are well reflected in the current biochar research in Europe (through comparison with published literature), but less so for soil pH and soil type. This study provides scope for future work to complement existing research findings, avoiding unnecessary repetitions and highlighting existing research gaps. © 2017 The Author(s) Published by VGTU Press and Informa UK Limited, [trading as Taylor & Francis Group].